PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352983.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 324aa MW: 36383.9 Da PI: 5.4773

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41	3.4e-13	129	180	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_027352983.1 129 QRMTHIAVERNRRKQMNEYLSVLRSLMPES---YVQRGDQASIIGGAINFVKELE 180 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MCLPEGERAM ALEAVVYPQP QDPFGYGIKD LYNYNLLEGG GGNWDYGDFN LEKEEQGCVS 60 FLENQTENYP YGDWNCSPPP MLPHINVSNS NPSSETSNTQ NLDSSTSTPP RPKRRRAKSR 120 KNKEEIENQR MTHIAVERNR RKQMNEYLSV LRSLMPESYV QRGDQASIIG GAINFVKELE 180 HRLQFLGAQK EKEIKSDKPF SEFFTFPQYS TCGSGGCDNS AATGEQLGGE VQSGIADIEV 240 TMVESHANLK IRSKKRPKQL LKMVTSLHGM RLTILHLNVT TTGDIVLYSL SVKVEDDCKL 300 GSVDEIAAAV YQMLDRIQQE SMLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	141	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-80	bHLH family protein