PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027352961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 211aa MW: 23285.5 Da PI: 7.9498 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.8 | 4.9e-40 | 14 | 115 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll ++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l XP_027352961.1 14 PCGACKFLRRKCAADCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQL 108 7*************************99******************************************************************* PP DUF260 95 allkeel 101 ++k++l XP_027352961.1 109 MQVKAQL 115 *999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MSMASSSGNG SGSPCGACKF LRRKCAADCI FAPYFCSEQG PARFAAIHKV FGASNVSKLL 60 LHIPAHDRCE AVVTIAYEAQ ARIRDPVYGC VSHIFALQQQ VACLQAQLMQ VKAQLAQNLM 120 ESRNIEKQWP GNNNVAGLPM NSSFCPNNYM NPISPQSSME SIDHNSINDG MGMQDIQSRE 180 DFSFQASSKK RSYNNHDLGE LQELALRMMR N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42430.1 | 2e-59 | LBD family protein |