PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352877.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 723aa MW: 79062.4 Da PI: 5.9949

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.3e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_027352877.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MDAYSSGEEV VVKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALVKG VPIGQALDID IPPPRPKRKP SNPYPRKTSI GTSILHSGAK 120 HGKSLISVAS SFGKQALDLE KEPFPEEAAC LSVSSANKNS MSVPLRNLCA LREFIPSEKD 180 VTRDETNDFF VTTELENQKS ETDGGKHAQQ NNGSFEVSEL ENSGASKLVQ SEKKDGLNCA 240 LTLDGMQGSQ NFPRHVPVHV VDGNLGASTQ NPSQNMLFRD SIFQPIGGVN GQPNLVTNSA 300 TENTTESQNN TARSSIHQSF PPCPPYTQHN QDDFQSFLHM SSTFSSLIVS TTLQNPAAHA 360 AASLAATFWP YANAETSADS SVCSKGFPSG QIGSSPSVAT IAAATVSAAT AWWAAHGLLP 420 LYAPLHAAFA CPPASAVTVP SPNIGESPQK TEQGEITLQN PPLQDQVLDP EHSEALQAQH 480 SASKSPVVSS SESEEIGDVN SNTISKADNH EINQEISEHP DSNKMKGRKQ VDRSSCGSNT 540 ASSSEETEVL EKDEKEKEEL KTADANHLAN EPSNRRSRCI SNLTDSWKEV SEEGRLAFQA 600 LFSREVLPQS FSPPHDLKNN DNQTDNIKDN KQSTDYKDED LDSKKCSSNC AGVQKNLPFV 660 ENNKEVEGLL TLGLGQGKLK THRTGFKPYK RCSVEANDNR IGMACNEEEK GPKRIRLDRE 720 AST

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MDAYSSGEEV VVKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALVKG VPIGQALDID IPPPRPKRKP SNPYPRKTSI GTSILHSGAK  120
HGKSLISVAS SFGKQALDLE KEPFPEEAAC LSVSSANKNS MSVPLRNLCA LREFIPSEKD  180
VTRDETNDFF VTTELENQKS ETDGGKHAQQ NNGSFEVSEL ENSGASKLVQ SEKKDGLNCA  240
LTLDGMQGSQ NFPRHVPVHV VDGNLGASTQ NPSQNMLFRD SIFQPIGGVN GQPNLVTNSA  300
TENTTESQNN TARSSIHQSF PPCPPYTQHN QDDFQSFLHM SSTFSSLIVS TTLQNPAAHA  360
AASLAATFWP YANAETSADS SVCSKGFPSG QIGSSPSVAT IAAATVSAAT AWWAAHGLLP  420
LYAPLHAAFA CPPASAVTVP SPNIGESPQK TEQGEITLQN PPLQDQVLDP EHSEALQAQH  480
SASKSPVVSS SESEEIGDVN SNTISKADNH EINQEISEHP DSNKMKGRKQ VDRSSCGSNT  540
ASSSEETEVL EKDEKEKEEL KTADANHLAN EPSNRRSRCI SNLTDSWKEV SEEGRLAFQA  600
LFSREVLPQS FSPPHDLKNN DNQTDNIKDN KQSTDYKDED LDSKKCSSNC AGVQKNLPFV  660
ENNKEVEGLL TLGLGQGKLK THRTGFKPYK RCSVEANDNR IGMACNEEEK GPKRIRLDRE  720
AST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-110	MYB_related family protein