PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027352143.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Whirly
Protein Properties Length: 238aa    MW: 26499.3 Da    PI: 9.8908
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027352143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly194.81.3e-60621981137
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                     svyk+kaa+++ + +ptf++ldsg+++++r+G++++ ++ a++erkydWek+q+falsatev++l+ +++++sceffhdp++ +sn+G+vrk+l+
  XP_027352143.1  62 SVYKGKAAFSLSPCLPTFTKLDSGTVVVERRGSIMMIFMHAVGERKYDWEKRQRFALSATEVGSLITMGPQDSCEFFHDPSMLSSNAGQVRKSLS 156
                     79********************************************************************************************* PP

          Whirly  96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137
                     ++P+++  G+fv+l+v n+l++++++fsvPv+ aefav++++
  XP_027352143.1 157 IKPHANSNGYFVSLTVVNNLLNTKDNFSVPVTTAEFAVMKTA 198
                     ****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MLKLSRALPF TSTCRLRLLR KAEVGDCPRD RHHFIYSAAF STATNNYSAK GYASDRIFAP  60
YSVYKGKAAF SLSPCLPTFT KLDSGTVVVE RRGSIMMIFM HAVGERKYDW EKRQRFALSA  120
TEVGSLITMG PQDSCEFFHD PSMLSSNAGQ VRKSLSIKPH ANSNGYFVSL TVVNNLLNTK  180
DNFSVPVTTA EFAVMKTACS FALPHIMGWD RITNQQSRST VGLQSKAGSQ VLDLEWDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.12e-90Whirly family protein