PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027352058.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Trihelix
Protein Properties Length: 275aa    MW: 30383.1 Da    PI: 9.1158
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027352058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix86.82.6e-2742134186
        trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rWt+qe+l+Li+++++ e+r++ g+       + +p+W+ vs++++++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s + + ++l+
  XP_027352058.1  42 RWTRQEILVLIQGKSDAESRFKPGRgggsafgSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQARDETESFWLMRNDLR 134
                     8*********************8866677777*********************************************9999999998888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MALDNPSNPN SVDGEPDGAG NGAPPSSAVD GDDGRPAARL PRWTRQEILV LIQGKSDAES  60
RFKPGRGGGS AFGSSEPKWA LVSSYCKKHG VNREPVQCRK RWSNLAGDYK KIKEWESQAR  120
DETESFWLMR NDLRRERKLP GYFDREVYDI LDSPSTAPPP PVEAPSTVVD EEVHLYDSNR  180
RVGGEDGLFS DCEKDEVLGT AKDVPAPVPI SVGSFGGKRS NINCTSKAAK GKAMLKVVPM  240
RNSQPQIQKW VLPLKGDRRG SDVQPMEKRK FYKVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-67Trihelix family protein