PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352041.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 477aa MW: 51694.8 Da PI: 7.2588

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352041.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	9e-31	238	296	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++v+++tYeg+Hnh+ XP_027352041.1 238 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDKTVLITTYEGNHNHP 296 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MDNPHHREFT FLDSGHRIDP PIKEMDFFSS SRKDNNINNN NDTNDHRQNH LDQDHHHANI 60 TNRPSPTRVT HQPINTGLNL TCASAGVSKA ENGENHETEL MSSLESELRR LQEENRKLKT 120 VLDQITRGYT QLQAQLFIAL QKQKPHQNIE GNGVMSGQKI VEAGPLTKLD VNDASVSDEK 180 TDCEACPDAS EDVLDRSSSQ SWGSSKFEEQ PKTPQPDQIP FRKARVSVRA RSEAPLISDG 240 CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DKTVLITTYE GNHNHPLPPA 300 ATAMASTTSA AAAMLLSGST PSKEAQTNSA GYFSSLPYAS MATLSASAPF PTITLDLTQT 360 PNAMQLHRVP GHSVTFPLPL HAPSGPQLLG HPLLLSQKLP PPALPLLQRQ PSTMVETVSA 420 AIASDPNFTA ALAAAISSII GAPRGLSDGN NNVGNNGNAV IPGSPQLPQS CTTFSTN

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MDNPHHREFT FLDSGHRIDP PIKEMDFFSS SRKDNNINNN NDTNDHRQNH LDQDHHHANI  60
TNRPSPTRVT HQPINTGLNL TCASAGVSKA ENGENHETEL MSSLESELRR LQEENRKLKT  120
VLDQITRGYT QLQAQLFIAL QKQKPHQNIE GNGVMSGQKI VEAGPLTKLD VNDASVSDEK  180
TDCEACPDAS EDVLDRSSSQ SWGSSKFEEQ PKTPQPDQIP FRKARVSVRA RSEAPLISDG  240
CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DKTVLITTYE GNHNHPLPPA  300
ATAMASTTSA AAAMLLSGST PSKEAQTNSA GYFSSLPYAS MATLSASAPF PTITLDLTQT  360
PNAMQLHRVP GHSVTFPLPL HAPSGPQLLG HPLLLSQKLP PPALPLLQRQ PSTMVETVSA  420
AIASDPNFTA ALAAAISSII GAPRGLSDGN NNVGNNGNAV IPGSPQLPQS CTTFSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	9e-67	WRKY family protein