PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027352034.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 397aa MW: 44550.7 Da PI: 7.2848

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027352034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.6	9.5e-07	4	34	5	35
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 C+ +++k + lfC+ ++ lC C ++ H XP_027352034.1 4 PCDFCDSKTAVLFCKADSAKLCLLCDQHVHA 34 6**************************9995 PP
2	CCT	64.2	4e-22	347	390	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a+lRYkeK+ktR+++K+irYesRKa+A++R+Rv+GrFvk++ XP_027352034.1 347 RGNAMLRYKEKKKTRRYDKHIRYESRKARADTRKRVRGRFVKAT 390 7789**************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MILPCDFCDS KTAVLFCKAD SAKLCLLCDQ HVHAANALSL KHVRYQICDT CKSDTASVRC 60 STHNLVLCHH CDSHAHSTAS PHHRHRLHGL SGCPSVPEIA SALGLDFSPD HPPQDPDCPV 120 VPTAAAPPKY NRDDVYQQVL EIARRRDFSA QSVQLKFNHH DTNNNHQNDV VDEMLLQQTP 180 FTSLLMLPSE SEFDARKSND NGYGAETGDL LWNCCPTYHT PQVWDFQLQK SRDCGEPRVL 240 TFDGLEETSL SIPRAFQDVH NMNCSTIGDD ILSRNNQSDQ SSSSHAKKKE ESNNKARDGF 300 SSESNLIESI TYSGTNNVTN MEHLVGGSEN VSSLKAKISL EELAKNRGNA MLRYKEKKKT 360 RRYDKHIRYE SRKARADTRK RVRGRFVKAT DITDVQA

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MILPCDFCDS KTAVLFCKAD SAKLCLLCDQ HVHAANALSL KHVRYQICDT CKSDTASVRC  60
STHNLVLCHH CDSHAHSTAS PHHRHRLHGL SGCPSVPEIA SALGLDFSPD HPPQDPDCPV  120
VPTAAAPPKY NRDDVYQQVL EIARRRDFSA QSVQLKFNHH DTNNNHQNDV VDEMLLQQTP  180
FTSLLMLPSE SEFDARKSND NGYGAETGDL LWNCCPTYHT PQVWDFQLQK SRDCGEPRVL  240
TFDGLEETSL SIPRAFQDVH NMNCSTIGDD ILSRNNQSDQ SSSSHAKKKE ESNNKARDGF  300
SSESNLIESI TYSGTNNVTN MEHLVGGSEN VSSLKAKISL EELAKNRGNA MLRYKEKKKT  360
RRYDKHIRYE SRKARADTRK RVRGRFVKAT DITDVQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.1	3e-68	CO-like family protein