PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351591.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 583aa MW: 66772.7 Da PI: 6.553

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.6	9.3e-30	129	214	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_027351591.1 129 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 214 8***********************************999*************************98..55667*****85 PP
2	trihelix	63.3	5.6e-20	427	509	2	84
trihelix 2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 W+++ev L+++r eme r+ + g++++ Weev+ km+ g+ers+ + kekwe++n++ k+ k+g+kkr +e+s+tc yfd+ XP_027351591.1 427 WPESEVTRLLQLRAEMEARFVQsGCSEEVMWEEVATKMSCFGYERSALMFKEKWESVNNYSKNAKDGNKKR-KENSRTCFYFDN 509 *****************97548******************************************8.78889***86 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MEMEDQHHHH HHHHHEQQQQ YGITDLRQLV NGPRSTHFPS IPQQPTAELF PAGHPNLAAT 60 QHYEMMMFGR QVADIMPRCL HDFASNDSAT NTSIAVATPT TTTSASTPPL SCLEAETAGC 120 IGGDASTGRW PRQETLTLLE IRSRLDSKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR 180 EKFENLYKYY KKTKEGKAGR QDGKHYRFFR QLEALYGENS NQASVPETNF VSSSLRFQTS 240 SHNPSQTNQE MFQSQKHCDS LSLTNSTELD TSSSDDNDHN SIGGHKDNDS VEKRRKRVSG 300 RSWKVKIKDF IDTQMRKLVE KQEEWLDKLT KTLEQKEKER VLREEEWRRQ EAARLEREHK 360 FWAKERAWIE ARDAALMEAL QKLTGSEIKS TQSPEGLMVT GIQSHNENQN EDGSEILNST 420 ARGVESWPES EVTRLLQLRA EMEARFVQSG CSEEVMWEEV ATKMSCFGYE RSALMFKEKW 480 ESVNNYSKNA KDGNKKRKEN SRTCFYFDNS DQSSLYNQGG AYCDINDQRQ ETGRLQTNDG 540 SSPSNSNVGN AVAGDNCFPF FMAEGGNLWE NYSLKVNKAN QNQ

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MEMEDQHHHH HHHHHEQQQQ YGITDLRQLV NGPRSTHFPS IPQQPTAELF PAGHPNLAAT  60
QHYEMMMFGR QVADIMPRCL HDFASNDSAT NTSIAVATPT TTTSASTPPL SCLEAETAGC  120
IGGDASTGRW PRQETLTLLE IRSRLDSKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR  180
EKFENLYKYY KKTKEGKAGR QDGKHYRFFR QLEALYGENS NQASVPETNF VSSSLRFQTS  240
SHNPSQTNQE MFQSQKHCDS LSLTNSTELD TSSSDDNDHN SIGGHKDNDS VEKRRKRVSG  300
RSWKVKIKDF IDTQMRKLVE KQEEWLDKLT KTLEQKEKER VLREEEWRRQ EAARLEREHK  360
FWAKERAWIE ARDAALMEAL QKLTGSEIKS TQSPEGLMVT GIQSHNENQN EDGSEILNST  420
ARGVESWPES EVTRLLQLRA EMEARFVQSG CSEEVMWEEV ATKMSCFGYE RSALMFKEKW  480
ESVNNYSKNA KDGNKKRKEN SRTCFYFDNS DQSSLYNQGG AYCDINDQRQ ETGRLQTNDG  540
SSPSNSNVGN AVAGDNCFPF FMAEGGNLWE NYSLKVNKAN QNQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	321	KRRKRVSGRSWKVKIKDFIDTQMRKLVEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-123	Trihelix family protein