PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027351488.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 846aa    MW: 92861.9 Da    PI: 6.2488
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027351488.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-181876357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_027351488.1 18 KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 76
                    6789*****************************************************97 PP
2START173.51.3e-541673742204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++ +++l  + +g  g+++lm
  XP_027351488.1 167 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDVLSIVPTGngGTIELM 260
                     68999*****************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++  +  p+   ss +vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_027351488.1 261 YMQTYAPTTLAAaRDFWTLRYTSSLEDGSLVICERSLTTSTGGPKgppSSTFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLY 355
                     *****************************************9999999*********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k + a+lq+ +
  XP_027351488.1 356 ESSKILAQKLTIAALQHIR 374
                     ****************866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 846 aa     Download sequence    
MALSMHKDSS NNQMDSSKYV RYTPEQVEAL ERVYAECPKP SSLRRQQLIR ECPILSNIEP  60
KQIKVWFQNR RCREKQRKEA SRLQTVNRKL TAMNKLLMEE NDRLQKQVSH LVYENGYMKQ  120
QIQTASAATT TDNSCESVVM SGQNQQQNPT PQHPQRDANN PAGLLAIAEE TLAEFLSKAT  180
GTAVDWVQMI GMKPGPDSIG IVAVSRNCSG VAARACGLVS LEPTKVAEIL KDRPSWYRDC  240
RCVDVLSIVP TGNGGTIELM YMQTYAPTTL AAARDFWTLR YTSSLEDGSL VICERSLTTS  300
TGGPKGPPSS TFVRAEMLPS GYLIRPCEGG GSIIHIVDHI DLDVWSVPEV LRPLYESSKI  360
LAQKLTIAAL QHIRQIAQES SGEIQYGGGR QPAVLRTFSQ RLCRGFNDAV NGFVDDGWSL  420
LGTDGVEDVT IAINSSPNKY LGSNYNSSMF PAFGGGVLCA KASMLLQNVP PALLVRFLRE  480
HRSEWADYGV DAYSAACLKA SPYAIPCARP GGFPSSQVIL PLAHTIEHEE FLEVVRIEGH  540
AFSPEDVALA RDMFLLQLCS GVDENAIGAC AQLVFAPIDE SFADDALLLP SGFRVIPLDP  600
KTDGPATTRT LDLASTLEVG SGNARPAGEA DLNGYNLRSV LTIAFQFTFE NHLRDNVAAM  660
ARQYVRSVVG SVQRVAMAIA PSRLSAQPGP KSLPGSPEAL TLARWICRSY RIHTGTELFR  720
VESTAGDAIL KQLWHHSDAI MCCSVKTNAS PVFTFANQAG LDMLETTLVA LQDIMLDKVL  780
DESGRKVLCS EFSKIMQQGF AYLPTGICVS SMNRPVSYEQ AIAWKVLNDD DSNHCLAFMF  840
MNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein