PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027351473.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NF-YC | ||||||||
Protein Properties | Length: 214aa MW: 24319.9 Da PI: 6.0118 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 118 | 4.3e-37 | 37 | 138 | 2 | 99 |
NF-YC 2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 l+ fw++q i++++ ++ ++ lPlari++i+k+d v+misae+P+l++kace+fi elt+r+w+ aee+++rt+k +dia+a+ +t++f fl XP_027351473.1 37 LRLFWQEQlfsIQSTQALRsQQPLPLARIRRIIKTDSGVQMISAETPILMAKACEIFIQELTFRAWMLAEESNKRTVKPCDIAKAILQTEVFHFL 131 899*****988888888886788************************************************************************ PP NF-YC 93 vdivprd 99 d+vp d XP_027351473.1 132 SDVVPSD 138 *****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MDFNSNSVSS NLPPNSMPMP PYPMDQYRQE ETEVEKLRLF WQEQLFSIQS TQALRSQQPL 60 PLARIRRIIK TDSGVQMISA ETPILMAKAC EIFIQELTFR AWMLAEESNK RTVKPCDIAK 120 AILQTEVFHF LSDVVPSDLL RFCAFDTKHE ENAGNIAEGS QASLPHPAGL MGNPMMNMGS 180 DQVARNHLIP QSYMMQPPFM PSDQLPYNCH TKSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 3e-35 | NF-YC family protein |