PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351419.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 240aa MW: 27167.7 Da PI: 6.2884

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed+ll+ +++++G g W++++++ g++R++k+c++rw++yl XP_027351419.1 9 KGAWSKMEDDLLKACIQLYGEGKWHLVPQRAGLNRCRKSCRLRWLNYL 56 79********************************************97 PP
2	Myb_DNA-binding	51.7	2e-16	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E +l ++++k+lG++ W++Ia +++ gRt++++k++w++y+ XP_027351419.1 62 RGDFSEDEIDLMIKLHKLLGNR-WSLIAGRLP-GRTPNDVKNYWNTYM 107 899*****************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MEGASGVRKG AWSKMEDDLL KACIQLYGEG KWHLVPQRAG LNRCRKSCRL RWLNYLKPNI 60 KRGDFSEDEI DLMIKLHKLL GNRWSLIAGR LPGRTPNDVK NYWNTYMRRK IESQKKDNNI 120 KQQEAILTVT PHEVIKPVPR TFSKNDSPSL QGRFIASNES GSKVGVSEAC AASSGSGNWW 180 ETLLEDKGGS VDMTDLWDEE LASITTACDF LTEGNNNWSD FLLDEDLLDT QILNVNVGDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	4e-59	MYB family protein