PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027351331.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 545aa    MW: 61249.6 Da    PI: 4.5468
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027351331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS118.58.3e-371795443374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +l+ +c ea+++g+++l++ +L  +s+ asp g++++Rla+y+ +  +++           l+ ++      ++  aal++f++  Pi k++h++
  XP_027351331.1 179 HLMEACGEALEQGQKALVEVILRCMSKKASPLGESLERLAFYLSQDTSNHGEY--------LKGEAF-----KNFEAALRAFYQGLPIGKIAHFA 260
                     77889*************************************88776666554........444444.....467789999************** PP

            GRAS  98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakrl 186
                       ++Ilea+ ++ +++Hi+Df i++G+QWp++++a+a + +   +l++T ++  +++        + eet+++L + A+++g+++  +    k +
  XP_027351331.1 261 SISTILEAIPEDcDAIHIVDFCIGHGVQWPPMIEAIAHKHK---TLKLTSIKWGDESsecvsTPCNFEETRRQLYENAKSCGLKLIVEE---KGV 349
                     *********7766************************9855...6******8755555688777899*****************97776...566 PP

            GRAS 187 edl..eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvksl.....sPkvvvvveqe..adh.nsesFlerflealeyysalfd 269
                     e+l  e+++++ k   +  la n+++ l ++  + +s++ +  e+L++ k+l     +  ++++ +     +  ns +F   f   l +y al++
  XP_027351331.1 350 EELviEIKKINKKGgrKVFLAFNCMMGLPHMG-KVMSIR-HALEFLRVAKDLinnsgNRGIITFGDGGafEKVkNSLNFRSFFDGHLVHYQALLE 442
                     66533777777666667789***********8.444444.589*******99554444569****9984323369******************** PP

            GRAS 270 sleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlg 361
                     s+e+ +p+   e+ri +E+ +l++ i+ +   ++ e  +r  +l   +    e  ++  +ls+++ ++++ +lr  + s   ++e ++ ++lvl 
  XP_027351331.1 443 SMESHFPTCFsEARIAMEQLFLQPCISFLDWLQTWEEMKRDCHL---E---AEISLEGCKLSKNILMEVREVLRGSDgSYQAKIEgQNFNELVLE 531
                     ******997559************99876666666644444433...3...456678899****************95555566666789***** PP

            GRAS 362 WkdrpLvsvSaWr 374
                     Wk+ +L+ +S+W+
  XP_027351331.1 532 WKGTQLLRFSSWK 544
                     ************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    
MMQPEILQSP WLFYEDMSST FDQVVESYGL TMDDHVGDCG SYGFTGDDHV DDCGLLLSTL  60
LSTQEDTASE VCSIPFPSSP IFPNDHVQYP IDEETLQLPS LMELDDFDSI LSTQINGIQG  120
HEYLGESEGS FPLQNLSSEV PHDAWSPTPS VMSELSTIQT SLTLPQENME IDNHVSLPHL  180
MEACGEALEQ GQKALVEVIL RCMSKKASPL GESLERLAFY LSQDTSNHGE YLKGEAFKNF  240
EAALRAFYQG LPIGKIAHFA SISTILEAIP EDCDAIHIVD FCIGHGVQWP PMIEAIAHKH  300
KTLKLTSIKW GDESSECVST PCNFEETRRQ LYENAKSCGL KLIVEEKGVE ELVIEIKKIN  360
KKGGRKVFLA FNCMMGLPHM GKVMSIRHAL EFLRVAKDLI NNSGNRGIIT FGDGGAFEKV  420
KNSLNFRSFF DGHLVHYQAL LESMESHFPT CFSEARIAME QLFLQPCISF LDWLQTWEEM  480
KRDCHLEAEI SLEGCKLSKN ILMEVREVLR GSDGSYQAKI EGQNFNELVL EWKGTQLLRF  540
SSWKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29065.12e-14GRAS family protein