PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351176.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 554aa MW: 59637.4 Da PI: 6.4134

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.6	1.7e-30	304	362	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_027351176.1 304 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILVTTYEGTHNHP 362 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MDKGWGLTLD TSSSPSLPLF PSKQPPTTIN SFSNDNMFPL LGFPVNLRTV TNKEDDDNRK 60 VLGEVDFFSD RNVKPNIIKK EIDDKPLQVN TGLQLLTANT GSDQSTVDDG VSSDAEDKRA 120 KTTELAQLQG ELQRMNAENK KLKEMLSHVS GNYTALQMHL MTLMQQNQRT ESTENEVVQG 180 KTEEKIHGVG EGKVPKQFLD IGPSGTAEVD DQVSDSSSEE RTRSSTPQNN NTEVGTRDCV 240 RNNTNNSKNE SGREESLDSE SQGWAPNKLQ KLNPSSSMDQ STAEATMRKA RVSVRARSEA 300 PMISDGCQWR KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTI LVTTYEGTHN 360 HPLPPAAMAM ASTTTAAASM LLSGSMSSAD GIMNPNLLAR AILPCSSSMA TLSASAPFPT 420 VTLDLTHNPN PLQLQRTPTP FQVPFLPGQP QNFGSGATPL AQAQALYNQS KFSGLQLSQE 480 VGSSHAPRPL LQPTQQPSLA DTVSAATAAI TADPNFTAVL AAAISSIIGG GAQANNSNSN 540 NNNNRTTISS FSGN

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MDKGWGLTLD TSSSPSLPLF PSKQPPTTIN SFSNDNMFPL LGFPVNLRTV TNKEDDDNRK  60
VLGEVDFFSD RNVKPNIIKK EIDDKPLQVN TGLQLLTANT GSDQSTVDDG VSSDAEDKRA  120
KTTELAQLQG ELQRMNAENK KLKEMLSHVS GNYTALQMHL MTLMQQNQRT ESTENEVVQG  180
KTEEKIHGVG EGKVPKQFLD IGPSGTAEVD DQVSDSSSEE RTRSSTPQNN NTEVGTRDCV  240
RNNTNNSKNE SGREESLDSE SQGWAPNKLQ KLNPSSSMDQ STAEATMRKA RVSVRARSEA  300
PMISDGCQWR KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTI LVTTYEGTHN  360
HPLPPAAMAM ASTTTAAASM LLSGSMSSAD GIMNPNLLAR AILPCSSSMA TLSASAPFPT  420
VTLDLTHNPN PLQLQRTPTP FQVPFLPGQP QNFGSGATPL AQAQALYNQS KFSGLQLSQE  480
VGSSHAPRPL LQPTQQPSLA DTVSAATAAI TADPNFTAVL AAAISSIIGG GAQANNSNSN  540
NNNNRTTISS FSGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-132	WRKY family protein