PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027351131.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 231aa MW: 25243.6 Da PI: 8.7267 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125.5 | 2.5e-39 | 32 | 133 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC C++apyf ++q p++fa+vhk+FGasnv kll ++p e+r++a+++++yeA+ar+ dPvyG+v+++l+lqqq+++l+ el XP_027351131.1 32 PCGACKFLRRKCHGACTFAPYFSSDQgPARFAAVHKVFGASNVAKLLLHIPMERRREAVATITYEAQARLADPVYGCVSTVLALQQQVASLQGEL 126 7************************999******************************************************************* PP DUF260 95 allkeel 101 a+++++l XP_027351131.1 127 AMVQNQL 133 ***9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MAEAQVGGNG SSGVARRKAL RRAMGAPPSQ PPCGACKFLR RKCHGACTFA PYFSSDQGPA 60 RFAAVHKVFG ASNVAKLLLH IPMERRREAV ATITYEAQAR LADPVYGCVS TVLALQQQVA 120 SLQGELAMVQ NQLINAKLAY ASALQNMQQQ QQHYQPYMNV PVQPSFSNNS SASTNPMNIN 180 YFNPGFNHAM EAAPSSHSFE PLQMSPLSHD EEGDEEESRI PFNRGIVLNR H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 1e-52 | LBD family protein |