PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027351067.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 142aa MW: 16704.1 Da PI: 7.8086 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28.4 | 5.4e-09 | 10 | 49 | 52 | 90 |
FAR1 52 rrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +++ a tr +C+a++k++++ +g w+v ++ +HnH+l+ XP_027351067.1 10 QEHGAITRFSCEAEMKIRLDVdKGCWVVCRFFDDHNHNLV 49 567789**************999***************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 142 aa Download sequence |
MYICNPNRVQ EHGAITRFSC EAEMKIRLDV DKGCWVVCRF FDDHNHNLVD ENYFGMLMSH 60 RKMDDGDVEQ MRRMRKSGIP TCKIYDSFVS QRGSYDMVGF CKKDIYNQIE RDRRGQDGDV 120 KEAEKFLISL RFKDLKLLGS QG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-11 | FAR1 family protein |