PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351058.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 573aa MW: 64725.5 Da PI: 5.936

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351058.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.6	7.3e-16	398	445	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h ++ErrRR+++N++f Lr+++P +K++Ka+iL ++eYIk+L+ XP_027351058.1 398 TSHVMAERRRREKLNERFLILRSMVPFI-----TKMDKASILGDTIEYIKQLR 445 79***********************7.....6***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MATPPNSRLQ SMLQAAVQSV QWTYSLFWQL CPQQGILTWG DGYYNGAIKT RKTVQAMEVS 60 TEEASLQRSE QLRELYESLS VGDTNLRRPS AALSPEDLTE SEWFYLLCVS FSFRPGYGLP 120 GMAYARRHHL WLTGANEASS KTFSRAILAK SAHIQTVVCI PVLEGVVELG TTDKVEKDLK 180 FIQHLKSFFI VIDEHPPMAM AALSEYSTSN PTSSYPPNIP NQDNNNVSDD NYKAEVQLDS 240 EPTTFPASEL MELDTFEDFR VGSPGDGSNH FDSFPSEESM SLCSPGLELL QLQPPPSPQP 300 PSESLAQGDT DTHYSQTVST ILQKNSRWWL DSPSTTHLTD SFQSAFNKWS TVANNDQPHL 360 HVAVTHVTSQ WLLKYILFSV PYLHANRLKP KGASSYETSH VMAERRRREK LNERFLILRS 420 MVPFITKMDK ASILGDTIEY IKQLRDKIEN LEVCDCNTRK RRVREVEVSI IERDALLEVE 480 CVHREGLLLD VIKVLRELGI EVVMVQSSVK DDGVFVAEIR AKVKEYVNGK RVSILEVKKL 540 LSQIIPHHEP CTFASNDHLS MRLDLGCMHL GMN

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MATPPNSRLQ SMLQAAVQSV QWTYSLFWQL CPQQGILTWG DGYYNGAIKT RKTVQAMEVS  60
TEEASLQRSE QLRELYESLS VGDTNLRRPS AALSPEDLTE SEWFYLLCVS FSFRPGYGLP  120
GMAYARRHHL WLTGANEASS KTFSRAILAK SAHIQTVVCI PVLEGVVELG TTDKVEKDLK  180
FIQHLKSFFI VIDEHPPMAM AALSEYSTSN PTSSYPPNIP NQDNNNVSDD NYKAEVQLDS  240
EPTTFPASEL MELDTFEDFR VGSPGDGSNH FDSFPSEESM SLCSPGLELL QLQPPPSPQP  300
PSESLAQGDT DTHYSQTVST ILQKNSRWWL DSPSTTHLTD SFQSAFNKWS TVANNDQPHL  360
HVAVTHVTSQ WLLKYILFSV PYLHANRLKP KGASSYETSH VMAERRRREK LNERFLILRS  420
MVPFITKMDK ASILGDTIEY IKQLRDKIEN LEVCDCNTRK RRVREVEVSI IERDALLEVE  480
CVHREGLLLD VIKVLRELGI EVVMVQSSVK DDGVFVAEIR AKVKEYVNGK RVSILEVKKL  540
LSQIIPHHEP CTFASNDHLS MRLDLGCMHL GMN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	404	409	ERRRRE
2	405	410	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-153	bHLH family protein