PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350981.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 714aa MW: 79242.2 Da PI: 5.6664

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.6	2.3e-23	131	231	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f k+lt sd++++g +++ +++a+e+ + +++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + +++ XP_027350981.1 131 FSKILTASDTSTHGGFSVLRRHATEClpqldMTQTTPTQELVAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL--RGEDG 223 889************************99555556679*********************************************..4499 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_027350981.1 224 ELRVGVRR 231 ******98 PP
2	Auxin_resp	104	1.9e-34	257	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t+++F v+Y+Pr+ s+F++ v+k+++a+++k+svGmRfkm+fe eds+err+sGt+vgv d++p WpnS+WrsLk XP_027350981.1 257 ASHAVLTSTMFVVYYKPRT--SQFIIGVNKYLDAINNKFSVGMRFKMRFEVEDSPERRFSGTIVGVGDVSP-GWPNSPWRSLK 336 689999**********6..9*********************************************.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MEPNLTAAAN SQSETGVGDE DLYTKLWKLC AGPLVDVPRS GERVFYFPQG HMEQLQASTN 60 QELNQELSQQ IPLFNLPSKI LCRVVHIQLL AEQETDEVYA RITLLPEANQ NEPTSPDPSV 120 PETQKQTFHY FSKILTASDT STHGGFSVLR RHATECLPQL DMTQTTPTQE LVAKDLHGFE 180 WKFKHIFRGQ PRRHLLTTGW STFVTSKRLV AGDAFVFLRG EDGELRVGVR RLARQQSPMP 240 SSVISSQSMH LGVLATASHA VLTSTMFVVY YKPRTSQFII GVNKYLDAIN NKFSVGMRFK 300 MRFEVEDSPE RRFSGTIVGV GDVSPGWPNS PWRSLKVQWD EPAIIPRPEM VSPWEIEPFG 360 ASTALNVAQP AVKSKRSRPA EVSSEIAPNS LAPAFWYHGP SLSHDPTQLG SAAENQSNEN 420 PVVWSSRQKE INGNPVNANS SSSKVRAEGM WSSSPHLNAS CNFFPDPKNN KAVATQLSVS 480 GSYPPVSSER NDDLAHDPVE SGKKTENPMD CWVFGVNLTN NFTNVTLPEK EIGCPAIIPS 540 GPKDSIAVAA CETEAAQNPN YSLSNKEQMQ VISDASPNEK QTKQATIVPS MRTRTKVQMQ 600 GVAVGRAVDL TVLKNYDDLI DELEKMFDIK GELRVQNKWA VTFTDDEDDM MLVGDDPWPE 660 FCSLVKRIFI YSKEEVKKMK CKHSAASSEG EGTMLSPDSQ NKDETQQISC DLTA

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MEPNLTAAAN SQSETGVGDE DLYTKLWKLC AGPLVDVPRS GERVFYFPQG HMEQLQASTN  60
QELNQELSQQ IPLFNLPSKI LCRVVHIQLL AEQETDEVYA RITLLPEANQ NEPTSPDPSV  120
PETQKQTFHY FSKILTASDT STHGGFSVLR RHATECLPQL DMTQTTPTQE LVAKDLHGFE  180
WKFKHIFRGQ PRRHLLTTGW STFVTSKRLV AGDAFVFLRG EDGELRVGVR RLARQQSPMP  240
SSVISSQSMH LGVLATASHA VLTSTMFVVY YKPRTSQFII GVNKYLDAIN NKFSVGMRFK  300
MRFEVEDSPE RRFSGTIVGV GDVSPGWPNS PWRSLKVQWD EPAIIPRPEM VSPWEIEPFG  360
ASTALNVAQP AVKSKRSRPA EVSSEIAPNS LAPAFWYHGP SLSHDPTQLG SAAENQSNEN  420
PVVWSSRQKE INGNPVNANS SSSKVRAEGM WSSSPHLNAS CNFFPDPKNN KAVATQLSVS  480
GSYPPVSSER NDDLAHDPVE SGKKTENPMD CWVFGVNLTN NFTNVTLPEK EIGCPAIIPS  540
GPKDSIAVAA CETEAAQNPN YSLSNKEQMQ VISDASPNEK QTKQATIVPS MRTRTKVQMQ  600
GVAVGRAVDL TVLKNYDDLI DELEKMFDIK GELRVQNKWA VTFTDDEDDM MLVGDDPWPE  660
FCSLVKRIFI YSKEEVKKMK CKHSAASSEG EGTMLSPDSQ NKDETQQISC DLTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein