PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350937.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 378aa MW: 41890.2 Da PI: 5.9438

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.3	2.7e-07	14	55	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 r+C+++ + ++fC+ ++ +lC++C + H H++ XP_027350937.1 14 RVCDTCRSAACTIFCRADSAYLCAECDSRVHAAnrvasrHER 55 79****99*****************9955566666765 PP
2	zf-B_box	28.6	3e-09	56	101	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ + C+ + lC +C +H+ H +vp+ XP_027350937.1 56 VWVCEACERAPAAFLCKADAASLCSSCDADIHSAnplasrHHRVPI 101 689*****************************66899999877775 PP
3	CCT	69.2	1e-23	309	352	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_027350937.1 309 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 352 9****************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MLETEPTPTP TWARVCDTCR SAACTIFCRA DSAYLCAECD SRVHAANRVA SRHERVWVCE 60 ACERAPAAFL CKADAASLCS SCDADIHSAN PLASRHHRVP ILPISGNLYG HHVHVADNDD 120 DDDEEDGADV EDEDEAASWL LLNPVKTNSV NNNNTQQNNG FLFSAEVDEY LDLVDHCNSS 180 ADADAENNHF TVAATTDHYT HHHQQHQHDQ LFGGVSQKSY AGDSVVPVQQ HHQGQHFQLG 240 FEFESSKAAF SYNGSVSQSV SVSSMDVGVV PESTIRDVSI AHSRPPKGTI DLFSGPPIQM 300 PSHLTPMDRE ARVLRYREKK KTRKFEKTIR YASRKAYAET RPRIKGRFAK RTAVEAEVDQ 360 MFSTTLITEV GYGIVPSF

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MLETEPTPTP TWARVCDTCR SAACTIFCRA DSAYLCAECD SRVHAANRVA SRHERVWVCE  60
ACERAPAAFL CKADAASLCS SCDADIHSAN PLASRHHRVP ILPISGNLYG HHVHVADNDD  120
DDDEEDGADV EDEDEAASWL LLNPVKTNSV NNNNTQQNNG FLFSAEVDEY LDLVDHCNSS  180
ADADAENNHF TVAATTDHYT HHHQQHQHDQ LFGGVSQKSY AGDSVVPVQQ HHQGQHFQLG  240
FEFESSKAAF SYNGSVSQSV SVSSMDVGVV PESTIRDVSI AHSRPPKGTI DLFSGPPIQM  300
PSHLTPMDRE ARVLRYREKK KTRKFEKTIR YASRKAYAET RPRIKGRFAK RTAVEAEVDQ  360
MFSTTLITEV GYGIVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	3e-89	CO-like family protein