PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350840.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 351aa MW: 39052.7 Da PI: 6.687

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.4	5.3e-07	10	54	2	40
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 ++r C+ +++ + l+C+ ++ lC +C e H+ Ht++ XP_027350840.1 10 QARPCDYCGHSTALLYCRADSAKLCFSCDREVHSTnqlfskHTRT 54 7899****99*******************668888888876 PP
2	zf-B_box	24.3	6.5e-08	56	98	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +++ ++++ C + + lC++C e H + H+++pl XP_027350840.1 56 LCDACDHSPATILCSTETSVLCQNCDWERH-NvslsslHERRPL 98 7*****************************.5489999988775 PP
3	CCT	61.2	3.3e-21	307	349	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R+ allRYk+K+ktR+++K+irYesRK++Ae R RvKGrF+k XP_027350840.1 307 RDSALLRYKQKKKTRRYDKHIRYESRKVRAEGRARVKGRFAKM 349 899**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MSGSPSSTQQ ARPCDYCGHS TALLYCRADS AKLCFSCDRE VHSTNQLFSK HTRTLLCDAC 60 DHSPATILCS TETSVLCQNC DWERHNVSLS SLHERRPLEG FTGCPSVTEL LTIVGFRDIG 120 KKALLSPEES DGFLGCEIEG LSSDLFVWDA PSVVSLDDLI SSSASSHNFQ AMEVPPMPKN 180 RKAACGRHRE EILGQLRELA KSEPLDPEEQ YVQSGNLSTG FERDMEADIF PSHEWHRESS 240 EQTYQVVPPD TSLRAYTEKI PVNHSTSAVG ETLTYGNSGG TPSVSLKSET LSTTPKAAPC 300 ELASQERDSA LLRYKQKKKT RRYDKHIRYE SRKVRAEGRA RVKGRFAKME H

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MSGSPSSTQQ ARPCDYCGHS TALLYCRADS AKLCFSCDRE VHSTNQLFSK HTRTLLCDAC  60
DHSPATILCS TETSVLCQNC DWERHNVSLS SLHERRPLEG FTGCPSVTEL LTIVGFRDIG  120
KKALLSPEES DGFLGCEIEG LSSDLFVWDA PSVVSLDDLI SSSASSHNFQ AMEVPPMPKN  180
RKAACGRHRE EILGQLRELA KSEPLDPEEQ YVQSGNLSTG FERDMEADIF PSHEWHRESS  240
EQTYQVVPPD TSLRAYTEKI PVNHSTSAVG ETLTYGNSGG TPSVSLKSET LSTTPKAAPC  300
ELASQERDSA LLRYKQKKKT RRYDKHIRYE SRKVRAEGRA RVKGRFAKME H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	322	QKKKTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	2e-86	CO-like family protein