PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350739.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 964aa MW: 109038 Da PI: 4.9074

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	9.6e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_027350739.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.8	1.6e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_027350739.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TKGKKAKRKA REKQLEEARR 180 LASLQKKREL KAAGIDIRQR RKKRKGIDYN AEIPFEKRPP PGFFDVTDEE RPVEQPKFPT 240 TIEELEGKRR VDVEAQLRKQ DIAKNKIAQR QDAPSAILHA NKLNDPETVR KRSKLMLPPP 300 QISDQELDEI AKLGYASDLA GTEEFAEGRS ATRALLANYA QTPSQGMTPL RTPQRTPAGK 360 GDSIMMEAEN LARLRESQTP LLGGENPELH PSDFSGVTPK KKEIQTPNPM LTPSATPGGA 420 GLTPRSGLTP ARDGFSFGTT PKGTPLRDEL HINEDMDMHD NAKLELRRQA DMRRSLRSGL 480 SSLPQPRNEY QIVMQPVPED AEEPEEKIEE DMSDRIAREK AEEEARQQAL LRKRSKVLQR 540 ELPRPPAASL ELIRNSLIKA DGDKSSFVPP TSIEQADEMI RKELLTLLEH DNAKYPLDEI 600 VNKEKKKGAK RAANGLAIPV IEDFQEDEIK DAEQLIKEEA EYLRVAMGHE NESLSEFVDA 660 HTTCINDLMY FATRNAYGLS SVAGNMEKLA ALQDEYENVR SKLDDGKEKM VRLEKKVTVL 720 TQGYEMRAKK SLWPQIEATF KQMDIASTEF ECFEALQKQE QLAASHRINN LWAEVQKQKE 780 LEKILQKKYG DLVAELERIQ NVMDQFRAKE AQQQEEIEAN NCAPEFIEAK TNEINVQGTE 840 NCEAVPLSVD HGSTISVSSS NDGTADPQAD MQDQTTSISK NDMDVDSCKE QMMDNTDDKL 900 PDAPSAEDNN EEVVEGKSTD GYIDSRDTTL DRSAAVETSS IEENREDRDV ENPNEVNAVD 960 QHGK

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TKGKKAKRKA REKQLEEARR  180
LASLQKKREL KAAGIDIRQR RKKRKGIDYN AEIPFEKRPP PGFFDVTDEE RPVEQPKFPT  240
TIEELEGKRR VDVEAQLRKQ DIAKNKIAQR QDAPSAILHA NKLNDPETVR KRSKLMLPPP  300
QISDQELDEI AKLGYASDLA GTEEFAEGRS ATRALLANYA QTPSQGMTPL RTPQRTPAGK  360
GDSIMMEAEN LARLRESQTP LLGGENPELH PSDFSGVTPK KKEIQTPNPM LTPSATPGGA  420
GLTPRSGLTP ARDGFSFGTT PKGTPLRDEL HINEDMDMHD NAKLELRRQA DMRRSLRSGL  480
SSLPQPRNEY QIVMQPVPED AEEPEEKIEE DMSDRIAREK AEEEARQQAL LRKRSKVLQR  540
ELPRPPAASL ELIRNSLIKA DGDKSSFVPP TSIEQADEMI RKELLTLLEH DNAKYPLDEI  600
VNKEKKKGAK RAANGLAIPV IEDFQEDEIK DAEQLIKEEA EYLRVAMGHE NESLSEFVDA  660
HTTCINDLMY FATRNAYGLS SVAGNMEKLA ALQDEYENVR SKLDDGKEKM VRLEKKVTVL  720
TQGYEMRAKK SLWPQIEATF KQMDIASTEF ECFEALQKQE QLAASHRINN LWAEVQKQKE  780
LEKILQKKYG DLVAELERIQ NVMDQFRAKE AQQQEEIEAN NCAPEFIEAK TNEINVQGTE  840
NCEAVPLSVD HGSTISVSSS NDGTADPQAD MQDQTTSISK NDMDVDSCKE QMMDNTDDKL  900
PDAPSAEDNN EEVVEGKSTD GYIDSRDTTL DRSAAVETSS IEENREDRDV ENPNEVNAVD  960
QHGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	205	KKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRKKRK
2	186	205	KKRELKAAGIDIRQRRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein