PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350738.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 476aa MW: 52139.5 Da PI: 7.8784

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.5	7.7e-16	276	322	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_027350738.1 276 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 322 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MQSQNHRPLR KTPTQRNSNH ATLAGPSTPR EVPPLVHNYN QHLFMQEGEM ASWLHYPIDD 60 HDSPLDQSFC ADFLCPPPTV NHNSVMQNLA RTSQPTELRK TPASMASRPP IPPPRRTEEA 120 PPKTPNFAYF SRHNARAEPG PSSTSKTAAR ESTVVDSCDT PAATAEVAAA SRVSETVRSS 180 AEPTEEPSGA AAPSTTSAGG ARSTMMCDLT MTSSLGGSSS SGEPVQMAAA QERKRKRKGR 240 ETEEWECQSE DVDFESEAKK QTRGSTFAKR SRAAEVHNLS ERRRRDRINE KMRALQELIP 300 RCNKSDKASM LDEAIEYLKS LQLQVQMMSM GCGMVPMMFP GIQQYMPAIG MGIGMEMGMN 360 RPVMPFPNML PGSALSAATA AAHLGPRFAM PPFHMPHVPA PDSSRMQAAN HSADINMATS 420 AGPPEPNQSR IPNFTDPYQY LGPQQTQFQL IQNQAVNQPN VSRPSASRGP ENPENH

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MQSQNHRPLR KTPTQRNSNH ATLAGPSTPR EVPPLVHNYN QHLFMQEGEM ASWLHYPIDD  60
HDSPLDQSFC ADFLCPPPTV NHNSVMQNLA RTSQPTELRK TPASMASRPP IPPPRRTEEA  120
PPKTPNFAYF SRHNARAEPG PSSTSKTAAR ESTVVDSCDT PAATAEVAAA SRVSETVRSS  180
AEPTEEPSGA AAPSTTSAGG ARSTMMCDLT MTSSLGGSSS SGEPVQMAAA QERKRKRKGR  240
ETEEWECQSE DVDFESEAKK QTRGSTFAKR SRAAEVHNLS ERRRRDRINE KMRALQELIP  300
RCNKSDKASM LDEAIEYLKS LQLQVQMMSM GCGMVPMMFP GIQQYMPAIG MGIGMEMGMN  360
RPVMPFPNML PGSALSAATA AAHLGPRFAM PPFHMPHVPA PDSSRMQAAN HSADINMATS  420
AGPPEPNQSR IPNFTDPYQY LGPQQTQFQL IQNQAVNQPN VSRPSASRGP ENPENH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	238	RKRKRK
2	281	286	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	6e-43	bHLH family protein