PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027350572.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family SBP
Protein Properties Length: 365aa    MW: 40672.8 Da    PI: 8.4809
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027350572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.23.2e-4078155178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +C v+gC++dl +++eyhrrh+vCe+hsk+pvvlv g++qrfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+
  XP_027350572.1  78 CCSVDGCNSDLRDCREYHRRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQP 155
                     6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MDWDWKEFAW DPCGLELANG ALDGQKNEAT SVDLRLGEIS EEKSAPDTPK DPKDSKTVSS  60
PSGSSKRSRL QNGSQNMCCS VDGCNSDLRD CREYHRRHRV CEKHSKTPVV LVGGKQQRFC  120
QQCSRFHSLG EFDEVKRSCR KRLDGHNRRR RKPQPPSLFM AAEKFMYNYK GPRILQFGSP  180
QTYANPIMRN MWPATAKTGA ESDYDPPRLL YRIDKHRQDK GHPLWLENDP KVVNGNEAMH  240
GTPICPPIRG AIAPSAGGKS SRKLSSDGKP GSFDSGCALY LLSTLQSQSP ELSMVQSSIT  300
CPTQSPPVAA QNQYACLERP KDKPSGQVLV LDANTTTLHR SGMLQMGPDG LVENEDSLTF  360
PSFWE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136153KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-42SBP family protein