PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350515.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 391aa MW: 43087.8 Da PI: 6.6767

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ + + g+ R++k+c++rw +yl XP_027350515.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPTKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_027350515.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PTKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG 120 IDPVTHKPKN DALLSSEGHS KSAANLSHMA QWESARLEAE ARLVRESKLR SHNSLQHHLG 180 TCGFPPPPSS SSSSASSSSS SAPVIPSSSS SRSLVATTRI NASGDLDLES PTSTLSFSEN 240 NAPPIMTSMI EFVGFSSERG TVKEEGEQEW KGYESATHLA EYKDGMENSM PFTSNLHELM 300 TMTMETTWGS ATESLRTSAS GAHAPVAEEG FTNLLLNNDS DDRSLSPDGA EESNKCHGSG 360 SGSEFYEDSK NYWNSIFNLV NYSPSSDSPM F

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PTKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG  120
IDPVTHKPKN DALLSSEGHS KSAANLSHMA QWESARLEAE ARLVRESKLR SHNSLQHHLG  180
TCGFPPPPSS SSSSASSSSS SAPVIPSSSS SRSLVATTRI NASGDLDLES PTSTLSFSEN  240
NAPPIMTSMI EFVGFSSERG TVKEEGEQEW KGYESATHLA EYKDGMENSM PFTSNLHELM  300
TMTMETTWGS ATESLRTSAS GAHAPVAEEG FTNLLLNNDS DDRSLSPDGA EESNKCHGSG  360
SGSEFYEDSK NYWNSIFNLV NYSPSSDSPM F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-123	MYB family protein