PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350422.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 558aa MW: 61740.9 Da PI: 8.3327

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.8e-16	58	104	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ede l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l XP_027350422.1 58 KGGWTAQEDETLRNAVAAYKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 104 688***************************.**********986 PP
2	Myb_DNA-binding	58.5	1.5e-18	110	156	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+++v++v ++G+ W++Ia+ ++ gR +kqc++rw+++l XP_027350422.1 110 KGPWTQKEDDQIVELVSKYGPTKWSLIAKSLP-GRIGKQCRERWHNHL 156 79****************************.***********97 PP
3	Myb_DNA-binding	53.5	5.4e-17	162	205	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++ +G++ W+ Ia+ ++ gRt++ +k++w++ XP_027350422.1 162 KDAWTLEEELALMNAHRIYGNK-WAEIAKVLP-GRTDNAIKNHWNS 205 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MAEEKSEECC QENKQSTAAS CSSVSEGSGS AIHKSPGICS PASTSPSHRT TGPIRRAKGG 60 WTAQEDETLR NAVAAYKGKS WKKIAEFFPD RSEVQCLHRW QKVLNPDLVK GPWTQKEDDQ 120 IVELVSKYGP TKWSLIAKSL PGRIGKQCRE RWHNHLNPDI KKDAWTLEEE LALMNAHRIY 180 GNKWAEIAKV LPGRTDNAIK NHWNSSLKKK LDFYLTTGRL PPIPKNNPQV SVKDTIRRSA 240 SKTILACSNK ELNAAVETSS ETTAISKLDD NGRNQFESSG TIREVGDSSS VPANESADSD 300 CVECKPGSSN IDLSCSNSEQ VSRANFGITY GPISENSRPN GNSTFEHCTT NGEMSSTRLI 360 RTSSQESPTC GSLCYEPPQL DGSVPLDSLY LNFVCQQNEY CLNPMLSPIG FLTPPRVQSS 420 DSYTETPESI LKKAAYTFPN TPSILRRRKS AVQSLTCPSK VLKVDDDPRT SNESERNKDD 480 SGSGRFSETP ARHANGSAIL NNRAFDASPP YRLRSKRTAV VKSVEKQLDF EFDKEKNIDK 540 RSNAMTKDHL HETKLGVT

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MAEEKSEECC QENKQSTAAS CSSVSEGSGS AIHKSPGICS PASTSPSHRT TGPIRRAKGG  60
WTAQEDETLR NAVAAYKGKS WKKIAEFFPD RSEVQCLHRW QKVLNPDLVK GPWTQKEDDQ  120
IVELVSKYGP TKWSLIAKSL PGRIGKQCRE RWHNHLNPDI KKDAWTLEEE LALMNAHRIY  180
GNKWAEIAKV LPGRTDNAIK NHWNSSLKKK LDFYLTTGRL PPIPKNNPQV SVKDTIRRSA  240
SKTILACSNK ELNAAVETSS ETTAISKLDD NGRNQFESSG TIREVGDSSS VPANESADSD  300
CVECKPGSSN IDLSCSNSEQ VSRANFGITY GPISENSRPN GNSTFEHCTT NGEMSSTRLI  360
RTSSQESPTC GSLCYEPPQL DGSVPLDSLY LNFVCQQNEY CLNPMLSPIG FLTPPRVQSS  420
DSYTETPESI LKKAAYTFPN TPSILRRRKS AVQSLTCPSK VLKVDDDPRT SNESERNKDD  480
SGSGRFSETP ARHANGSAIL NNRAFDASPP YRLRSKRTAV VKSVEKQLDF EFDKEKNIDK  540
RSNAMTKDHL HETKLGVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-147	MYB family protein