PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350421.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 559aa MW: 61897.1 Da PI: 8.4258

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.8e-16	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ede l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l XP_027350421.1 59 KGGWTAQEDETLRNAVAAYKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	58.5	1.5e-18	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+++v++v ++G+ W++Ia+ ++ gR +kqc++rw+++l XP_027350421.1 111 KGPWTQKEDDQIVELVSKYGPTKWSLIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	53.5	5.4e-17	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++ +G++ W+ Ia+ ++ gRt++ +k++w++ XP_027350421.1 163 KDAWTLEEELALMNAHRIYGNK-WAEIAKVLP-GRTDNAIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MAEEKSEECC QENKQSTAAS CSSVSEGSGS AIHKSPGICS PASTSPSHRR TTGPIRRAKG 60 GWTAQEDETL RNAVAAYKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQKEDD 120 QIVELVSKYG PTKWSLIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALMNAHRI 180 YGNKWAEIAK VLPGRTDNAI KNHWNSSLKK KLDFYLTTGR LPPIPKNNPQ VSVKDTIRRS 240 ASKTILACSN KELNAAVETS SETTAISKLD DNGRNQFESS GTIREVGDSS SVPANESADS 300 DCVECKPGSS NIDLSCSNSE QVSRANFGIT YGPISENSRP NGNSTFEHCT TNGEMSSTRL 360 IRTSSQESPT CGSLCYEPPQ LDGSVPLDSL YLNFVCQQNE YCLNPMLSPI GFLTPPRVQS 420 SDSYTETPES ILKKAAYTFP NTPSILRRRK SAVQSLTCPS KVLKVDDDPR TSNESERNKD 480 DSGSGRFSET PARHANGSAI LNNRAFDASP PYRLRSKRTA VVKSVEKQLD FEFDKEKNID 540 KRSNAMTKDH LHETKLGVT

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MAEEKSEECC QENKQSTAAS CSSVSEGSGS AIHKSPGICS PASTSPSHRR TTGPIRRAKG  60
GWTAQEDETL RNAVAAYKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQKEDD  120
QIVELVSKYG PTKWSLIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALMNAHRI  180
YGNKWAEIAK VLPGRTDNAI KNHWNSSLKK KLDFYLTTGR LPPIPKNNPQ VSVKDTIRRS  240
ASKTILACSN KELNAAVETS SETTAISKLD DNGRNQFESS GTIREVGDSS SVPANESADS  300
DCVECKPGSS NIDLSCSNSE QVSRANFGIT YGPISENSRP NGNSTFEHCT TNGEMSSTRL  360
IRTSSQESPT CGSLCYEPPQ LDGSVPLDSL YLNFVCQQNE YCLNPMLSPI GFLTPPRVQS  420
SDSYTETPES ILKKAAYTFP NTPSILRRRK SAVQSLTCPS KVLKVDDDPR TSNESERNKD  480
DSGSGRFSET PARHANGSAI LNNRAFDASP PYRLRSKRTA VVKSVEKQLD FEFDKEKNID  540
KRSNAMTKDH LHETKLGVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-149	MYB family protein