PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350397.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 606aa MW: 67099.6 Da PI: 6.3184

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.5	2.3e-13	435	481	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ + K++Ka+ L A+ YI++Lq XP_027350397.1 435 NHVEAERQRREKLNQRFYALRSVVPNiS------KMDKASLLGDAIAYINELQ 481 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MKVEVGLGRV VWDDEEKAMV AGVLGARAFE FLMTNSVSNE SLLMAVGSDE GLQNKLSDLV 60 ERPNGSNFSW NYAIFWQLSQ SKSGEWVLGW GDGCCREPNE EEESVLSGIL SLSMEDEMQQ 120 RRRKRVLQKL HTTFGGSDED NYAFGLDHVT DTEMFFLASM YFSFPRGHGG PGKCFASGKH 180 FWLKSVSDYC VRSYLAKSAR IQTVVLVPTE LGVVELGSVR MLAESFELLQ AIKTVFSTQP 240 SYPGVKPVPA VSDKRDESAI FTGLAIGDGG KVDGVLPKVS VNSGSRTHFR EKLAIRKMED 300 RPAWGGHPNG NNINFPNLRN GLHGPSWVPN QAARQPSPIE IFAPRSSTSN VSELGNGVRQ 360 DFRLNNNYQP QRQVQMQIDF SGATSRSFAR PVLAESELSD VEASCKEEQP SVVADERRPR 420 KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAIAYINEL 480 QAKLKMMEAE RERFGSTSRD GSVLEGSSRS ENHLVKAPDV DIEAVQDEVV VRVSCPLDTH 540 PVSKVIQTLK DAQISVVESK LAAADDTIFH TFVIKSQGSE QLTKDKLIAV FSEESNSLLQ 600 PLSSVG

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MKVEVGLGRV VWDDEEKAMV AGVLGARAFE FLMTNSVSNE SLLMAVGSDE GLQNKLSDLV  60
ERPNGSNFSW NYAIFWQLSQ SKSGEWVLGW GDGCCREPNE EEESVLSGIL SLSMEDEMQQ  120
RRRKRVLQKL HTTFGGSDED NYAFGLDHVT DTEMFFLASM YFSFPRGHGG PGKCFASGKH  180
FWLKSVSDYC VRSYLAKSAR IQTVVLVPTE LGVVELGSVR MLAESFELLQ AIKTVFSTQP  240
SYPGVKPVPA VSDKRDESAI FTGLAIGDGG KVDGVLPKVS VNSGSRTHFR EKLAIRKMED  300
RPAWGGHPNG NNINFPNLRN GLHGPSWVPN QAARQPSPIE IFAPRSSTSN VSELGNGVRQ  360
DFRLNNNYQP QRQVQMQIDF SGATSRSFAR PVLAESELSD VEASCKEEQP SVVADERRPR  420
KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAIAYINEL  480
QAKLKMMEAE RERFGSTSRD GSVLEGSSRS ENHLVKAPDV DIEAVQDEVV VRVSCPLDTH  540
PVSKVIQTLK DAQISVVESK LAAADDTIFH TFVIKSQGSE QLTKDKLIAV FSEESNSLLQ  600
PLSSVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	417	425	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein