PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350130.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GeBP

Protein Properties

Length: 411aa MW: 45568.3 Da PI: 4.5419

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	122.3	2.4e-38	109	204	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlw++eDei lLqG++d+++++g+s ++d+ fy+++k++++++++k+qlveKirrLKkK+++ +k+ sgke+sf+++hdq +fe+s+kiW XP_027350130.1 109 LFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIW 203 79********************************************************************************************* PP DUF573 97 g 97 XP_027350130.1 204 S 204 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MASQQHDTVF PEEEMDDDDE ESQEDEEEEE DDDDVLVDDE ENEPSPSASS ALAVTVAVPG 60 STVSNGGNAP ISAATATATT IVVHDSPDPK RRRVEQIEEK KPLDDSRRLF QRLWTDEDEI 120 ELLQGFLDYT SQRGSSHHND TALFYDQIKS KLQLDFNKNQ LVEKIRRLKK KYRNVLNKIG 180 SGKEFSFKSA HDQATFEISR KIWSNMAPIG DNSMDDDEIN LNPIPNPNPN PNLNFSPIVP 240 KNEVMFGNSV EKKTRKRSRP RSAIKVDEKR ESIDGSASNK DQNCIRNATT TATATATATP 300 ITNTNNNSNC NSGYSNSIPS LIEETVRRCL SPLLKELVGG AMAGPFGARG LNLNPVPLMN 360 LNFGGGDLVD EKWRKQQILE LEVYSKRLEL VQDQIKATME ELRSSGGGGG G

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MASQQHDTVF PEEEMDDDDE ESQEDEEEEE DDDDVLVDDE ENEPSPSASS ALAVTVAVPG  60
STVSNGGNAP ISAATATATT IVVHDSPDPK RRRVEQIEEK KPLDDSRRLF QRLWTDEDEI  120
ELLQGFLDYT SQRGSSHHND TALFYDQIKS KLQLDFNKNQ LVEKIRRLKK KYRNVLNKIG  180
SGKEFSFKSA HDQATFEISR KIWSNMAPIG DNSMDDDEIN LNPIPNPNPN PNLNFSPIVP  240
KNEVMFGNSV EKKTRKRSRP RSAIKVDEKR ESIDGSASNK DQNCIRNATT TATATATATP  300
ITNTNNNSNC NSGYSNSIPS LIEETVRRCL SPLLKELVGG AMAGPFGARG LNLNPVPLMN  360
LNFGGGDLVD EKWRKQQILE LEVYSKRLEL VQDQIKATME ELRSSGGGGG G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	94	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-78	GeBP family protein