PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350012.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 448aa MW: 49555.9 Da PI: 5.2156

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.2e-11	263	305	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L XP_027350012.1 263 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 305 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MERYTLPLPL PSLPWMEPQL EEEEEEEEAA SWTAPYSEPN HDQHHIAISM PAPLTSFKSM 60 LQQPQPPPEP QPHCYFNSSI SNPFVPNPTT TTTPTDNFLM HPHSINIDSF PLDPSPSLPF 120 FNTNTFDSGF DLGLEAGFLP GNHSSNSPLF MGFSPAHTGS EFGELGALIP SRAKALKPLE 180 APQPTLFQKR RGSVEIPGLE TVRRKGREWE EGEGEEGNSI DVDAYDSDDQ IENGNGLNPS 240 DTVTVTGGDH KGKKKGLPAK NLMAERRRRK KLNDRLYMLR SVVPKISKMD RASILGDAID 300 YLKELLQRIN DLHNELESTP PGSLLPASSS FHPLTPTPPT LPCRVKEELY PGSLPSPKNQ 360 AAKVEVRVRE GRAVNIHMFC TRRPGLLLST MRALDNLGLD VQQAVISCFN GFALDVFRAE 420 QCREGQDVLP EQIKAVLLDS AGFHACSL

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MERYTLPLPL PSLPWMEPQL EEEEEEEEAA SWTAPYSEPN HDQHHIAISM PAPLTSFKSM  60
LQQPQPPPEP QPHCYFNSSI SNPFVPNPTT TTTPTDNFLM HPHSINIDSF PLDPSPSLPF  120
FNTNTFDSGF DLGLEAGFLP GNHSSNSPLF MGFSPAHTGS EFGELGALIP SRAKALKPLE  180
APQPTLFQKR RGSVEIPGLE TVRRKGREWE EGEGEEGNSI DVDAYDSDDQ IENGNGLNPS  240
DTVTVTGGDH KGKKKGLPAK NLMAERRRRK KLNDRLYMLR SVVPKISKMD RASILGDAID  300
YLKELLQRIN DLHNELESTP PGSLLPASSS FHPLTPTPPT LPCRVKEELY PGSLPSPKNQ  360
AAKVEVRVRE GRAVNIHMFC TRRPGLLLST MRALDNLGLD VQQAVISCFN GFALDVFRAE  420
QCREGQDVLP EQIKAVLLDS AGFHACSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	253	271	KKKGLPAKNLMAERRRRKK
2	265	272	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-116	bHLH family protein