PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027349916.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WOX

Protein Properties

Length: 261aa MW: 29663.2 Da PI: 6.2542

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027349916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.7	3e-21	85	145	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + + +ps+e+++e++++l +++e++V++WFqNrRa+ k+ XP_027349916.1 85 RQRWTPTAVQLQILERIFDQgTGTPSKEKIKEITAELsqhgQISETNVYNWFQNRRARSKR 145 89***************99************************************97 PP
2	Wus_type_Homeobox	103.6	1.3e-33	84	147	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPt+ Q++iLe+++++G+ tP+ke+i++itaeL+++G+i+++NV++WFQNr+aR+++kq XP_027349916.1 84 SRQRWTPTAVQLQILERIFDQGTGTPSKEKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQ 147 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MVNMMEWQKQ RWQPNGNAEM MYVKVMTDEQ LETLRKQIAV YATICEQLIE MHKTISAHQD 60 LAGIRLGNMY CDPLVASAGH KLTSRQRWTP TAVQLQILER IFDQGTGTPS KEKIKEITAE 120 LSQHGQISET NVYNWFQNRR ARSKRKQQNV ASSVHTESEM EAEVDSKDKK TKPDEFQSRP 180 SVTMGPADNL CFQNPNDLQY LNPESNKPDS VFSSDGSLRS THVPAFDGML SNSRSDYLTG 240 KMEAPESYNL YQPAGDYNMA G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	147	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-86	WOX family protein