PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027349905.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 820aa    MW: 89369.3 Da    PI: 6.2487
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027349905.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.41.8e-21125180156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l+L++rqVk+WFqNrR+++k
  XP_027349905.1 125 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLNLETRQVKFWFQNRRTQMK 180
                     688999***********************************************999 PP
2START207.55.1e-653365601206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W +s     e++n +e++++ ++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t+
  XP_027349905.1 336 ELALAAMDELVKMAQTGEPLWIRSLeggrEILNHEEYTRTMTPCIGlkpsgFVSEASRETGMVIINSLALVETLMDSN-RWLEMFPcviaRTSTT 429
                     5899*************************************99988999999**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evissg      galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS++  ++ +  + +v +++lpSg+++++++ng+skvtwveh+
  XP_027349905.1 430 EVISSGingtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIETIRETSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHA 524
                     ************************************************************999******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h+l+r+l++sg+ +ga++wvatlqrqce+
  XP_027349905.1 525 EYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQCEC 560
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 820 aa     Download sequence    
MSFGGFLEKK QGGGGARIVA DIAYNNGSNH NNSISNDRMP SSAISQPRLA TPTLAKSMFN  60
SPGLSLALQS DIDGQEDVNR LMAESFEGNG LRRNREEEHE SRSGSDNMDG GSGDDFDAAD  120
NPPRKKRYHR HTPQQIQELE ALFKECPHPD EKQRLELSKR LNLETRQVKF WFQNRRTQMK  180
TQLERHENSL LRQENDKLRA ENMSMREAMR NPICSNCGGP AMIGEISLEE QHLRIENARL  240
KDELDRVCAL AGKFLGRPVS SLASSIGPPL PNSSLELGVG SNGFGGLNTV PSTLPLGPDF  300
GVGISSSLGM VSPPSRPTTV VSTGFDRSVE RSIFLELALA AMDELVKMAQ TGEPLWIRSL  360
EGGREILNHE EYTRTMTPCI GLKPSGFVSE ASRETGMVII NSLALVETLM DSNRWLEMFP  420
CVIARTSTTE VISSGINGTR NGALQLMHAE LQVLSPLVPV REVNFLRFCK QHAEGVWAVV  480
DVSIETIRET SGAPTFVNCR RLPSGCVVQD MPNGYSKVTW VEHAEYEESQ VHQLYRPLLS  540
SGMGFGAQRW VATLQRQCEC LAILMSSAVP SREHSAISGG GRRSMLKLAQ RMTNNFCAGV  600
CASTVHKWNK LNAGNVGEDV RVMTRKSVDD PGEPPGIVLS AATSVWLPVS PQRLFDFLRD  660
DRLRSEWDIL SNGGPMQEMA HIAKGQDHAN SVSLLRASAM NANQSSMLIL QETCTDASGS  720
LVVYAPVDIP AMHVVMNGGD SAYVALLPSG FAIVPDGPGS SEDQGGASQQ RVSGSLLTVA  780
FQILVNSLPT AKLTVESVET VNNLISCTVQ KIKAALHCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein