PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027349202.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HSF
Protein Properties Length: 513aa    MW: 57911.9 Da    PI: 5.8358
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027349202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind89.93.2e-28782072101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT...................... CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks...................... 74 
                     Fl+k++++++d++++ ++sw  +g sfvv+d++ fa++vLp++Fkh+nf+SFvRQLn+Y    v+++  +                         
  XP_027349202.1  78 FLSKTFDLVQDPSIDPIVSWAFTGVSFVVWDPTLFARHVLPRHFKHNNFSSFVRQLNTYVGIAVTHNCPS--Lffpfpppflpfllaapsilksl 170
                     9**********************************************************98888888766..2469*************999999 PP

                     ..........XTTSEEEEESXXXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  75 ..........kekiweFkhksFkkgkkellekikrkk 101
                               +++ weF ++ F++gkk+ll++i+r++
  XP_027349202.1 171 giciqgfrkiDTDKWEFFNEAFQRGKKDLLKNIQRRR 207
                     988877765449***********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MNPKQLNDPK LTAPEGTLEL SSILLDYDET LLSSSFLRDT FSIPSPPSQL PSSSAEFEKV  60
ISFPQPLECL QGNPVPPFLS KTFDLVQDPS IDPIVSWAFT GVSFVVWDPT LFARHVLPRH  120
FKHNNFSSFV RQLNTYVGIA VTHNCPSLFF PFPPPFLPFL LAAPSILKSL GICIQGFRKI  180
DTDKWEFFNE AFQRGKKDLL KNIQRRRPPQ PQQVGSNIGP YTDATKSGLE FEIEGLRKER  240
RVLMQEVVEL QQQQLTMLQR ARQVNQRLQS AEQIQKQTVS FLAKLFENPS FSTHLKHEKE  300
QRDMGSHRVK RKFVKQHQDQ TEISDSLNEG KIVRYQPDWK NITISSEMPD IYSVSTEQSP  360
NYLSQVLAKE GKENLIPGEL AVVHEVMPTV EIIEGSSNFG LEGTLFKGKN VMSLSQQILA  420
EDFVSFPEAL TKEAKVPEFS PLGTESIMKL EDIWNTNFNV SGALSSSGSE PWENPIHHEV  480
LEFGVISGMS EMWDIGSLRA KGTFLTDGST PLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.11e-69HSF family protein