PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 28021.3 Da PI: 9.3686 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.7 | 2.3e-26 | 43 | 93 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n s rqvtfskRr+g++KKA+ELS+LCda++a+i+fs t kl+ey+s XP_027348665.1 43 KKIDNISSRQVTFSKRRKGLFKKAQELSTLCDADIALIVFSATSKLFEYAS 93 68***********************************************86 PP | |||||||
2 | K-box | 54.3 | 5.6e-19 | 124 | 202 | 18 | 96 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + + L++++e re+R++ GedL+ L+l+eLq+Le+ L+++l++i + K+e ++++i++l++ke el een++L++ XP_027348665.1 124 SDSNDMLRQKVEDKNRELRQMNGEDLQGLTLQELQKLEELLKRGLTNISKVKDEKIMQEISTLKRKEVELTEENQKLKQ 202 455577999********************************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MLNMLDLLYI LSGESLSFIF FLDARVWVFL MYREMTRKRI QIKKIDNISS RQVTFSKRRK 60 GLFKKAQELS TLCDADIALI VFSATSKLFE YASSSMHQVI ERRDRHSASH RLDRPAIDQL 120 QLESDSNDML RQKVEDKNRE LRQMNGEDLQ GLTLQELQKL EELLKRGLTN ISKVKDEKIM 180 QEISTLKRKE VELTEENQKL KQVPSLTHVQ RQSSESIIST SSYLPEDGGG DTCLKLGLPL 240 LK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-45 | MIKC_MADS family protein |