PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027348637.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 466aa    MW: 52421.7 Da    PI: 5.9045
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027348637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS301.81.7e-92534632373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalkl..fsevsPil 91 
                     ++lL++cA+a++++d +laq++L+ l+++a pdgd++qRla+ f++AL ar a+  ++++k l   e++++n    ++++++ +l  f++++P++
  XP_027348637.1  53 EQLLVHCANAIETNDVTLAQQILWVLNNIALPDGDSNQRLASGFLRALTARAAK--TGTCKMLVGVEDARTNftiDTHKFSVIQLanFVDLTPWH 145
                     79****************************************************..9999999888888888665555566666699******** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvl. 181
                     +f++ +aN+aIlea+eg + +Hi+D++ ++++Q p+L++a+asR e pp +++T+ +++  +       ++ee+g +L +fA++ +v +ef+++ 
  XP_027348637.1 146 RFGFTAANSAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVPPLIKLTVANANCREipplLDLSYEELGTKLINFARSRNVVMEFRAVs 240
                     *******************************************************999877799988999***********************85 PP

            GRAS 182 ..vakrledleleeLrvkp............gEalaVnlvlqlhrll....................desvsleserdevLklvkslsPkvvvvv 242
                       ++ +  ++ +e+Lrv++             Eal++n++++lh+++                    +  +s++s r+ +Lk+++sl P+vv++v
  XP_027348637.1 241 ssYE-DGFAVLIEQLRVQQqqnlvyasearpSEALVINCHMMLHYIPdetlssipdtnpssyiydfsSIVTSTSSLRSLFLKALRSLDPTVVILV 334
                     5322.33344588887777777777777888*********************************99733444444677***************** PP

            GRAS 243 eqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqa 337
                     +++ad +s++++ r+ +a++y +  +d++++ lpr s++r+++E   + ++i+nv+a+eg +r+er e +++W++r+++a F+ +++se+ ++++
  XP_027348637.1 335 DEDADFTSNNLVCRLKSAFNYLWIPYDTVDTFLPRGSKQRQWYESD-ICWKIENVIAHEGVQRVERVEPKNRWEQRMRNASFQGIAFSEDCVAEV 428
                     **********************************************.************************************************ PP

            GRAS 338 klllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     k++l +++  g+ +++e++ +vl+Wk++++v++SaW
  XP_027348637.1 429 KAMLDEHA-AGWGLKKEDEHIVLTWKGHNVVFASAW 463
                     ********.999************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MTQFTPLLHQ ITPLSNPNPS MNKNQIPRTR PWPATGFLTS KALTNFGDTN CMEQLLVHCA  60
NAIETNDVTL AQQILWVLNN IALPDGDSNQ RLASGFLRAL TARAAKTGTC KMLVGVEDAR  120
TNFTIDTHKF SVIQLANFVD LTPWHRFGFT AANSAILEAT EGFSVIHIVD LSSTHCMQIP  180
TLIDAIASRH EVPPLIKLTV ANANCREIPP LLDLSYEELG TKLINFARSR NVVMEFRAVS  240
SSYEDGFAVL IEQLRVQQQQ NLVYASEARP SEALVINCHM MLHYIPDETL SSIPDTNPSS  300
YIYDFSSIVT STSSLRSLFL KALRSLDPTV VILVDEDADF TSNNLVCRLK SAFNYLWIPY  360
DTVDTFLPRG SKQRQWYESD ICWKIENVIA HEGVQRVERV EPKNRWEQRM RNASFQGIAF  420
SEDCVAEVKA MLDEHAAGWG LKKEDEHIVL TWKGHNVVFA SAWFNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-170GRAS family protein