PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348425.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 477aa MW: 52711.6 Da PI: 4.9668

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348425.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.2e-30	240	299	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ +d +++++tYeg+Hnh+ XP_027348425.1 240 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCIDDMSILITTYEGTHNHP 299 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MEIDLSLKID TDDEQKEEKA EAAKEDERVI EDDEEEMAQI LSDNKEEVPE ATSGVIEDDA 60 SVVETSLQDN TKTKELSEIQ MEMESMKEEN KILRKVVEQT MKDYYDLQMK FSAIQENNKR 120 KDHQISLSLQ DNATTSDEGP SRILEIFNKK IQSASSPPNT DGIISEGELG LSLRLQTSTS 180 QIETDEGNKE DKKEQLASFA SVQNKLQRTH ELPGITTHAA SPPNRKARVS VRARCEAATM 240 NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CIDDMSILIT TYEGTHNHPL 300 PVGATAMAST ASAAASFMLL DSSNPISDGT SSFIQTPIPY NSFHPLTPAS NYRSLNPNDP 360 SKGIVLDLTN NLSEPLRFST GSSSNTTTES RFSWMPNKYQ GGAIAMNNFH KPIPLDHDRI 420 WKGEESKPLE DNVSAIASDP KFRVAVAAAI TSLMNKESHP THPIGTSFGH RSGQNGS

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MEIDLSLKID TDDEQKEEKA EAAKEDERVI EDDEEEMAQI LSDNKEEVPE ATSGVIEDDA  60
SVVETSLQDN TKTKELSEIQ MEMESMKEEN KILRKVVEQT MKDYYDLQMK FSAIQENNKR  120
KDHQISLSLQ DNATTSDEGP SRILEIFNKK IQSASSPPNT DGIISEGELG LSLRLQTSTS  180
QIETDEGNKE DKKEQLASFA SVQNKLQRTH ELPGITTHAA SPPNRKARVS VRARCEAATM  240
NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CIDDMSILIT TYEGTHNHPL  300
PVGATAMAST ASAAASFMLL DSSNPISDGT SSFIQTPIPY NSFHPLTPAS NYRSLNPNDP  360
SKGIVLDLTN NLSEPLRFST GSSSNTTTES RFSWMPNKYQ GGAIAMNNFH KPIPLDHDRI  420
WKGEESKPLE DNVSAIASDP KFRVAVAAAI TSLMNKESHP THPIGTSFGH RSGQNGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	6e-78	WRKY family protein