PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 28024.9 Da PI: 8.1268 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.1 | 1.1e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++nrqvtf+kRrng+lKK ELS+LCdaev +i+fsstgkl+ey+s XP_027348389.1 10 RIENSTNRQVTFCKRRNGLLKKSRELSILCDAEVGLIVFSSTGKLHEYAS 59 8***********************************************86 PP | |||||||
2 | K-box | 73.7 | 5.3e-25 | 84 | 171 | 12 | 99 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + + +q+++a +k++++ + +R+l+Ge+L++L ++eLq+Le+qL slkk+R kK++ ++++i+el +k ++++n +L++k++ XP_027348389.1 84 SAIKFWQEKAASVKQQLQHFEDCHRQLMGEELSDLGINELQHLEKQLLMSLKKVRIKKDQTFTDKIKELHEKGSLIHQQNAELHNKID 171 56899********************************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MGRGKIAIRR IENSTNRQVT FCKRRNGLLK KSRELSILCD AEVGLIVFSS TGKLHEYAST 60 SMESVIERYD KQREDHYQPV DPASAIKFWQ EKAASVKQQL QHFEDCHRQL MGEELSDLGI 120 NELQHLEKQL LMSLKKVRIK KDQTFTDKIK ELHEKGSLIH QQNAELHNKI DLMHKEKTEL 180 QKVIEARRRE EEKTASNPAN THRYEYDIVE PLSLQLSQPQ PQYSEAPEEA MNLGHSLKLL 240 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14210.1 | 3e-76 | MIKC_MADS family protein |