PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027348207.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 233aa MW: 27353.3 Da PI: 6.2419 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+ +++++G ++W+ ++ g+ R++k+c++rw +yl XP_027348207.1 14 KGAWSEEEDQRLLAYIERYGHPNWRQLPKFAGLARCGKSCRLRWMNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.6 | 1.2e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+ E++++ d++k++G++ W++Ia+ ++ gRt++++k++w+++l XP_027348207.1 67 RGNYTQKEEQIITDLHKKHGNK-WSLIAENLP-GRTDNEIKNYWHSHL 112 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 233 aa Download sequence |
MVRAPYFDKN GIKKGAWSEE EDQRLLAYIE RYGHPNWRQL PKFAGLARCG KSCRLRWMNY 60 LRPNLKRGNY TQKEEQIITD LHKKHGNKWS LIAENLPGRT DNEIKNYWHS HLKKFLRRNE 120 NTTCHELKSE YIEFEGPISE GVSVDSHHIL ESSVSMSSET SYPEDNSPSF SSSHRESTLN 180 LSREEDSVAS WETLDAFSSN FWTEPFISEN ALDQNYFPIS CYGAEREEPF FLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G31180.1 | 3e-56 | MYB family protein |