PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348203.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 322aa MW: 35921.9 Da PI: 6.6222

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++ +G+g+W+t ++ g+ R++k+c++rw +yl XP_027348203.1 14 KGPWTPEEDLKLINYIQIHGPGNWRTLPKVAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.1	1.8e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE++++++++ lG++ W++Ia++++ gRt++++k++w+++ XP_027348203.1 67 RGRFSLEEEDIIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MGRVPCCDKN GLKKGPWTPE EDLKLINYIQ IHGPGNWRTL PKVAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SLEEEDIIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIKKRLLRMG 120 IDPVTHTPRL DLFDMSSILR SVLGNPSLLN TQGLLGGQVL MNPVLLKLVA AASLLSIKNT 180 EDPDLAPQNH VQSQVAPPLE FTQTTNVEGF LGNMANLSCS SSSPNSTPSS LGENLVLQQN 240 KVDLLGDPDL VHLMHNIKQN MGYDDSVLTT PVSNPNQLNS SSTYVNSGME EERDNYYNDL 300 FKFDIPEGLD ISEFFCSVPL TN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	3e-91	MYB family protein