PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348182.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 225aa MW: 26069 Da PI: 8.4766 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 118.9 | 3e-37 | 11 | 108 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++r+kC+++C+lapyfp++++++f +vh++FG+sn++kl+k+++ee+r+++++sl++eA++r+rdP++G +g ++k+ ++++++ el+ XP_027348182.1 11 ACAACKHQRKKCSENCILAPYFPSNRNREFHAVHRVFGVSNITKLVKNAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVLDELK 105 7****************************************************************************************999998 PP DUF260 96 llk 98 + + XP_027348182.1 106 RFR 108 765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MQRNTNGMHP ACAACKHQRK KCSENCILAP YFPSNRNREF HAVHRVFGVS NITKLVKNAK 60 EEDRRRVVDS LIWEACCRQR DPIHGPYGEY TKVYNEYKKV LDELKRFRGQ NHLLQLPPLG 120 LKSVQDLIAC NGTKGEHKAE VDNALDYLHG NKNGIIDSNI YSTYCSNYLQ EFQNIRPEVV 180 MPFQQHSQPY FIAGINDFCC HRLISIILFF LYEVWVVITA LLCGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06280.1 | 1e-37 | LBD family protein |