PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | YABBY | ||||||||
Protein Properties | Length: 256aa MW: 28911.3 Da PI: 9.3102 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 145 | 8e-45 | 9 | 156 | 1 | 163 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 +d++ s+++Cyv+CnfCnt+lav +P + l+ vtv+CGhC++l + + ++++ + +h l ++ + + k+ as+s XP_027348069.1 9 MDMVPPSDHLCYVRCNFCNTVLAVGIPCKRLLDAVTVKCGHCSNLSFLRTRPQHNQNQCIDH-----------SLSLQG--FYC-DFKKGLASSS 89 578899**************************************977665555555555554...........222222..222.1222222222 PP YABBY 96 vsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ss +++++ +p++ p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + XP_027348069.1 90 SSS--STKSREPVSPKAAPfVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 156 222..1344556677777769**********************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MNHEEKVTMD MVPPSDHLCY VRCNFCNTVL AVGIPCKRLL DAVTVKCGHC SNLSFLRTRP 60 QHNQNQCIDH SLSLQGFYCD FKKGLASSSS SSSTKSREPV SPKAAPFVVK PPEKKHRLPS 120 AYNRFMKEEI QRIKAANPEI PHREAFSAAA KNWARYIPNS PTNSVSAIKN DEKYRNGLLP 180 NWHSSSGPVE CAVKGQMDTV SHYCMSMSWA GLHGLHLLFL AELLRLFYFD MLFLFIRQVR 240 LQLPRRTGVA KGEAED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 1e-62 | YABBY family protein |