PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347908.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 424aa MW: 47164.8 Da PI: 6.3768

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.2	2.8e-16	104	149	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_027347908.1 104 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 149 899***************************.*********996 PP
2	Myb_DNA-binding	57	4.5e-18	156	199	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_027347908.1 156 RRAFTEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 199 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MDSLSLCSNY GVVSAVSSSH QDCYGSTSWG SPFMRQCLGR SFEEHPNSDG VEEGKGSDSS 60 DDGVGEDSDK VNLNANNFNE ENPNENSLSG KEVVDTGHSK LCARGHWRPA EDSKLKELVA 120 LYGPQNWNLI AEKLEGRSGK SCRLRWFNQL DPRINRRAFT EEEEERLMQA HRIYGNKWAM 180 IARLFPGRTD NAVKNHWHVI MARKYREQSS AYRRRRLSQS VYRRVEENTT SSFVSRDTAA 240 TAVTEQPPPH YCLNVTNGGL GNNIATFPYA AASFHGGGGV DYGLNGSPHM TGDKEAISTT 300 KLAPPHIGLY AQPTPLDFIS GGRSNDIVGE YFGQNRCWDR PSDAHSHHHQ PSDFYPHYPP 360 QQYVMLMQHQ NNHNFYGFSN STAQILGSEP SLSSVAEHRD EALNSDPPDA IPPPFIDFLG 420 VGAT

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MDSLSLCSNY GVVSAVSSSH QDCYGSTSWG SPFMRQCLGR SFEEHPNSDG VEEGKGSDSS  60
DDGVGEDSDK VNLNANNFNE ENPNENSLSG KEVVDTGHSK LCARGHWRPA EDSKLKELVA  120
LYGPQNWNLI AEKLEGRSGK SCRLRWFNQL DPRINRRAFT EEEEERLMQA HRIYGNKWAM  180
IARLFPGRTD NAVKNHWHVI MARKYREQSS AYRRRRLSQS VYRRVEENTT SSFVSRDTAA  240
TAVTEQPPPH YCLNVTNGGL GNNIATFPYA AASFHGGGGV DYGLNGSPHM TGDKEAISTT  300
KLAPPHIGLY AQPTPLDFIS GGRSNDIVGE YFGQNRCWDR PSDAHSHHHQ PSDFYPHYPP  360
QQYVMLMQHQ NNHNFYGFSN STAQILGSEP SLSSVAEHRD EALNSDPPDA IPPPFIDFLG  420
VGAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	212	217	YRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-72	MYB family protein