PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347856.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 315aa    MW: 35449.7 Da    PI: 6.7422
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.31.3e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l++++ ++G+g +W + +++ g++R++k+c++rw++yl
   XP_027347856.1 14 KGPWSPEEDSKLKEYIDKHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding36.98.3e-1269111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g ++ eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
   XP_027347856.1  69 GDFSDEEDRIICSLYVNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      679******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MGRAPCCDKA SVKKGPWSPE EDSKLKEYID KHGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGD FSDEEDRIIC SLYVNIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGL  120
LPLSHHSKQP QFPSSSLQNP PLSPSHQLYG DYCPITTSSF SCIEPLSLPS SNYASTSCTT  180
TSGSLPFYQN QESMVSISPM QCYYPIRDNM LMFGSEGSCS SSDGSCTQGR EIKQEEMGYQ  240
SYNDNNFMLS YNSINDGGEN VNQYGEKLGV GGCFDHNLTP LDCDLEDIKQ LISSSSFNNL  300
DENKTREKGM YYYYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.11e-73MYB family protein