PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347850.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 212aa MW: 24849.1 Da PI: 6.8067

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.4	1.2e-18	54	107	4	57
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++++t eq++ Le+ F +++++ +++ +LA +lgL+ rqV vWFqNrR ++k+ XP_027347850.1 54 KRKLTVEQVNLLEQNFGNEHKLESQRKDRLALELGLDPRQVAVWFQNRRSRWKN 107 5689************************************************95 PP
2	HD-ZIP_I/II	110.3	1.3e-35	53	143	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkr+l+ eqv+lLE++F +e+kLe++rK +la eLgl+prqvavWFqnrR R+k+k+lE++y+ Lk+ ++a+ e+++Le+ev +L+++l XP_027347850.1 53 KKRKLTVEQVNLLEQNFGNEHKLESQRKDRLALELGLDPRQVAVWFQNRRSRWKNKKLEEEYTNLKNLHEAILLEKCHLEAEVLKLEKQLL 143 9**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MNHLPIEDHV MPFSQLYPDS FAQITPQQGE NKPRRRRNKK NKGGENGAMD TVKKRKLTVE 60 QVNLLEQNFG NEHKLESQRK DRLALELGLD PRQVAVWFQN RRSRWKNKKL EEEYTNLKNL 120 HEAILLEKCH LEAEVLKLEK QLLEANKEIQ RLLERADRAP SNSSNSSQSQ SMDAVNPPFL 180 GEFSVEVYDD GDVFYIPETH YINGMEWINL YM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	34	56	RRRRNKKNKGGENGAMDTVKKRK
2	35	57	RRRRNKKNKGGENGAMDTVKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	2e-62	HD-ZIP family protein