PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347602.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 170aa    MW: 19448 Da    PI: 10.4431
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC35.12.9e-11671521299
           NF-YC  12 katdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     ++++ k h +P+ ri+ ++k  ed++  s ea   + ka e f+ ++t  ++  + + ++++l+   +a +v++   +dfl d vp++
  XP_027347602.1  67 DEEEAKTHVFPMNRIRTMIKG-EDLR-ASQEALLAINKATEKFLEQFTQDAYAGSVQDRKKSLNYKHLACVVSKQRRYDFLSDFVPEK 152
                     4567899*********99996.5665.699*******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MASSNNPKSE KKKIKNREIS ITKSKSKTKK DRDLEKEKEN KKKNNKKLKL SNGKSKRQEE  60
EEQVGGDEEE AKTHVFPMNR IRTMIKGEDL RASQEALLAI NKATEKFLEQ FTQDAYAGSV  120
QDRKKSLNYK HLACVVSKQR RYDFLSDFVP EKVRAEDALR ERNSGGNGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.13e-28NF-YC family protein