PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027347602.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NF-YC | ||||||||
Protein Properties | Length: 170aa MW: 19448 Da PI: 10.4431 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 35.1 | 2.9e-11 | 67 | 152 | 12 | 99 |
NF-YC 12 katdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 ++++ k h +P+ ri+ ++k ed++ s ea + ka e f+ ++t ++ + + ++++l+ +a +v++ +dfl d vp++ XP_027347602.1 67 DEEEAKTHVFPMNRIRTMIKG-EDLR-ASQEALLAINKATEKFLEQFTQDAYAGSVQDRKKSLNYKHLACVVSKQRRYDFLSDFVPEK 152 4567899*********99996.5665.699*******************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MASSNNPKSE KKKIKNREIS ITKSKSKTKK DRDLEKEKEN KKKNNKKLKL SNGKSKRQEE 60 EEQVGGDEEE AKTHVFPMNR IRTMIKGEDL RASQEALLAI NKATEKFLEQ FTQDAYAGSV 120 QDRKKSLNYK HLACVVSKQR RYDFLSDFVP EKVRAEDALR ERNSGGNGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 3e-28 | NF-YC family protein |