PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347489.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LSD
Protein Properties Length: 116aa    MW: 12725.8 Da    PI: 9.5466
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD147.92.2e-152852125
         zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                    Cg+Cr lLsYPrGA++V+C++C+tV
  XP_027347489.1 28 CGSCRRLLSYPRGAKHVKCSCCQTV 52
                    ************************9 PP
2zf-LSD140.93.4e-136690125
         zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                    Cg+C +lL+YP+G++ VRC++C +V
  XP_027347489.1 66 CGSCAVLLMYPYGSSQVRCSSCRFV 90
                    **********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MMARHQGGNP SPLRHHHDLP VGSAQMICGS CRRLLSYPRG AKHVKCSCCQ TVNIVFEADQ  60
VGQVKCGSCA VLLMYPYGSS QVRCSSCRFV TEIGAHNRRP PWSVQQRKPT PSKAGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21610.14e-42LSD family protein