PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347361.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 408aa MW: 45264.9 Da PI: 7.2104

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +++++G g+W++ +++ g+ R++k+c++rw +yl XP_027347361.1 14 KGPWTPEEDQKLMAYIEEFGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51	3.4e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia+ ++ +Rt++++k++w+++l XP_027347361.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIAAQLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MGRSPCCEKV GLKKGPWTPE EDQKLMAYIE EFGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIAAQLPKRT DNEIKNYWNT HLKKRLTRMG 120 IDPTTHKPKT DALGGSGSCQ SKDVANLSHM AQWESARLEA EARLVRESKL QVQNNLGSCS 180 SPQPARLVLN KITTQQPSLP PCLDVLKAWQ SSWSKPQPTT TGTKDNNKIM HSMYAMMLST 240 DDTLESPTST LNFPGTVLPV PTNNVGVIFN ENNNLLPLTT TTNATPNPCE GGFMKGISDH 300 NTMLHLQDDD IMAAVEAFRS NTTRYKNNSN NNNVAPALSS NVVLEGLNND DALVYDSNDN 360 LASQEENLAI INGDGSICNV SLEENNKHYW NNILNLVNDS LQSDSSVF

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MGRSPCCEKV GLKKGPWTPE EDQKLMAYIE EFGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIAAQLPKRT DNEIKNYWNT HLKKRLTRMG  120
IDPTTHKPKT DALGGSGSCQ SKDVANLSHM AQWESARLEA EARLVRESKL QVQNNLGSCS  180
SPQPARLVLN KITTQQPSLP PCLDVLKAWQ SSWSKPQPTT TGTKDNNKIM HSMYAMMLST  240
DDTLESPTST LNFPGTVLPV PTNNVGVIFN ENNNLLPLTT TTNATPNPCE GGFMKGISDH  300
NTMLHLQDDD IMAAVEAFRS NTTRYKNNSN NNNVAPALSS NVVLEGLNND DALVYDSNDN  360
LASQEENLAI INGDGSICNV SLEENNKHYW NNILNLVNDS LQSDSSVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-103	MYB family protein