PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347331.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 205aa MW: 22356.3 Da PI: 4.7331

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.5	9.8e-43	39	138	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da++s+vyeA ar+rdPvyG++g i +lq q+++l+a+la XP_027347331.1 39 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQTQVNELQAQLA 133 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_027347331.1 134 KAQAE 138 *9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MESSDTYTPT SSAPLSQSPT SSSSSPPPPP QVPQVVMSPC AACKILRRRC AEKCVLAPYF 60 PPTEPAKFTI AHRVFGASNI IKFLQELPES QRADAVTSMV YEASARIRDP VYGCAGAICQ 120 LQTQVNELQA QLAKAQAELV NMQLQQANLV ALICMEMAQS PQESSPQQSV DNFISSPPHS 180 SGYQSGMNFF EENNSLNSLW EPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28500.1	8e-63	LBD family protein