PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027347328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | WRKY | ||||||||
Protein Properties | Length: 616aa MW: 66894.9 Da PI: 5.933 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.6 | 1.7e-30 | 353 | 411 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+ XP_027347328.1 353 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTVLITTYEGNHNHP 411 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 616 aa Download sequence |
MVRGGGLSMD SDPIGSFFLH KPIVLNSFPE DINHAKWKLS PNNNMEATIS TKGSSSSPPS 60 IPFQVNLSSS SNNHVSSPSE MDFFSDKNNN KDDKVAASTS ASVPDTDHQT HDRSSTPPML 120 ECKVNTGLNL LTTNTTSDQS MVEDDMSGYS EDKRTKNELA VLQAEIERTK GENHRLREML 180 DQVNTNYKAL HMHLVNLMQE QKGVEAEEQE EFDGKLEEKK QNENGGVLVP RQFMDLGLAT 240 NADTDEPSSS SAGRSQDPSG SPVNNNNNNV EVASKELGTS KNVNVSDEGV AYDQREKKEY 300 GRENEREDSP SGHAFAGDKI PRFSPPKNVD QAESTMRKAR VSVRARSEAP MITDGCQWRK 360 YGQKMAKGNP CPRAYYRCTM AAGCPVRKQV QRCAEDRTVL ITTYEGNHNH PLPPAAMAMA 420 QTTSSAARML LSGSMSSADS LMNPNFFTRT LLPCSSSMAT ISASAPFPTV TLDLTQSPNP 480 NSLQLPRPSS QLQIPFPGVP QNFANSPASL MPQIFGQALY NQSKFSGLQM SHDADPSSQL 540 VNRTPQVPPR ITDTVSAAIA ADPNFTAVLA AAITSIIGGA QQHNNNNNNS SNNNNTNDNM 600 TTSNNNGNIT SSNGKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-120 | WRKY family protein |