PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347090.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 361aa MW: 40715.5 Da PI: 6.5026

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+ ++ g+ R++k+c++rw +yl XP_027347090.1 14 KGPWTPEEDQKLIDYIQKYGYGNWRILPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.8e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_027347090.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIASRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KYGYGNWRIL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSPILT SSLYASSHIN IQRLLGTQTM VNPELLKLAS SLFSSHQNGQ 180 QNHLCNTQIP QFVQSQDSAQ ETSGTPCMLN HPCVPLPSTQ AELVESNMNP YPSFSPTFGF 240 QQHSQLSDWH CNGLIASSTI TDDYVSVPQL PSYNYHSSDY DYANLMDPPI SETSTFHSNN 300 SNHNFSFASV LSTPSSSPTP LNSNSTYING STTTEDETES YVTSNILRFE IPDMLGVNEF 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KYGYGNWRIL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIASRLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSPILT SSLYASSHIN IQRLLGTQTM VNPELLKLAS SLFSSHQNGQ  180
QNHLCNTQIP QFVQSQDSAQ ETSGTPCMLN HPCVPLPSTQ AELVESNMNP YPSFSPTFGF  240
QQHSQLSDWH CNGLIASSTI TDDYVSVPQL PSYNYHSSDY DYANLMDPPI SETSTFHSNN  300
SNHNFSFASV LSTPSSSPTP LNSNSTYING STTTEDETES YVTSNILRFE IPDMLGVNEF  360
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-120	MYB family protein