PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027346894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 235aa MW: 25677.3 Da PI: 8.5085 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 98.2 | 8.6e-31 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C+++C+l+p++ +++q +++ +v+k+FG++ ++++++++p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+ XP_027346894.1 2 SCNGCRVLRKGCSESCILRPCLqwmetAEAQGHATVFVAKFFGRAGLMSFISNVPQNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQA 96 6*********************9999777889*************************************************************** PP DUF260 91 kaelall 97 ++e++l+ XP_027346894.1 97 AVETVLR 103 *998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MSCNGCRVLR KGCSESCILR PCLQWMETAE AQGHATVFVA KFFGRAGLMS FISNVPQNQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVET VLRGGTLRPI PELMGLEAPA 120 SAADEASEAE VACTDTWRIR EPNPNPNFRF TSSRSHNKVS SSGKRKRSEE LVKLQAGPNL 180 DLRLTPIFLQ KVEKRRSGSP SMTSEESVTT TACLESGIGD QWGHGGDRKV LNLFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49940.1 | 7e-83 | LBD family protein |