PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346859.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HSF
Protein Properties Length: 400aa    MW: 45641.9 Da    PI: 4.6531
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.52.5e-34151062102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+ye+++d+++++++sws +++sf+v+++ +fa+++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+         weF+++ F +g+ +l+++
  XP_027346859.1  15 FLAKTYEMVDDPSTDSIVSWSVTNKSFIVWNPPDFARDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANDDFVRGQPHLMKN 100
                     9********************999****************************************9998.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_027346859.1 101 IHRRKP 106
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MMDEAHGSSS SLPPFLAKTY EMVDDPSTDS IVSWSVTNKS FIVWNPPDFA RDLLPRFFKH  60
NNFSSFIRQL NTYGFRKIDP EQWEFANDDF VRGQPHLMKN IHRRKPVHSH SLQNLHAQIP  120
IGESERQSFT DEIEKLKHDK EQLLMELQKY QHEWQTCEIK IRCSNDRLEK LEQKQEVMVS  180
SVSQVLQKSV IAVNILPLTE TLDRKRRLPR SGYFNDEASI EDAIETSQTL PRVNAENTSV  240
LTLNMERLDQ LESSMVFWEA IAHDVGDSLV QIQSNMDFDE STSCADSPSI SCAQLDVEVR  300
PKSSGIDMNA EPTAVGVPEP VASKEQPAGT TVAVTGVNDV FWEQFLTEDP GASEAQEVQS  360
ERKDYDGRTN EGKPSDFGKF WWYMRNANNL PEPMGHVEKT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203208DRKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18880.11e-112HSF family protein